| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84352 |
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| Symbol | |
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| ID | 4840270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1468314 |
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| End bp | 1469253 |
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| Gene Length | 940 bp |
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| Protein Length | 300 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391585 |
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| Product | predicted protein |
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| Protein accession | XP_001385980 |
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| Protein GI | 126138914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTATTCTATA TAGTATAGAT CTTTGAAAGT AGTAGTAATG TCTGCCTCTC AAGAATTGAC
CCATCCCTCC ATCAAGGACG GCTGGTTTGC TGAAGTTTCC GACACCATGT GGCCTGGCCA
AGCCATGTCC TTGAAGGTCG AAAAGGTTTT GCACACCGAA AAGTCCAAGT ACCAGGACGT
TTTAGTTTTC AAGTCCGAGA CGTACGGCAA TGTCTTGGTT TTGGATAACT GTATCCAAGT
CACTGAACGT GACGAGTTCT CCTACCAAGA GATGATCACC CACTTGGCCC TCAACTCTCA
CCCTAACCCA AAGAAGGCTT TGGTTATTGG TGGCGGAGAC GGTGGTGTCT TGAGAGAAAT
CTTGAAGCAC GAGTCCATTG AAGAAGCTTG GTTGTGTGAC ATCGACGAAA CTGTCATTGA
AGTTTCCAAG AAGTACTTGC CTGAGATGTC CAAGTCCTAC AATGACCCAA GAACCAAGGT
TCACATTGGT GATGGTTTCA AGTTCTTGGC TGAGTACAAG AACCAATTCG ATGTCATCAT
CACCGACTCT TCTGACCCAG AAGGTCCAGC TGAGTCGTTG TTCCAAAAGC CTTACTTCGA
GTTGTTGAGC GGTGCTTTAA CCGAAAAGGG TGTTATCACT ACCCAAGCTG AAAACATCTG
GTTGCACATG CCTATCATCT CCAAGTTGAA GCAAGACTGT AAGCAGATTT TTGCTGTGGC
TGAGTACGGC TACACCATGA TTCCAACTTA CCCTTCGGGC TCCATTGGTT TCATGGTCTG
CTCCAAGGAT CCAAACGCTG ACGTCACCAA GCCAATCAGA TTTGACTGGT CCGACGAATT
CGTGTCGAAG AACTTGAAGT ACTACAACAA GAGAATCCAC GAAGCTGCCT TCGTCTTGCC
TACCTGGGCT GACGAAATTT TAAACAAGAA CAACGCCTGA
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| Protein sequence | MSASQELTHP SIKDGWFAEV SDTMWPGQAM SLKVEKVLHT EKSKYQDVLV FKSETYGNVL
VLDNCIQVTE RDEFSYQEMI THLALNSHPN PKKALVIGGG DGGVLREILK HESIEEAWLC
DIDETVIEVS KKYLPEMSKS YNDPRTKVHI GDGFKFLAEY KNQFDVIITD SSDPEGPAES
LFQKPYFELL SGALTEKGVI TTQAENIWLH MPIISKLKQD CKQIFAVAEY GYTMIPTYPS
GSIGFMVCSK DPNADVTKPI RFDWSDEFVS KNLKYYNKRI HEAAFVLPTW ADEILNKNNA
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