Gene PICST_79236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_79236 
Symbol 
ID4840065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp869957 
End bp870679 
Gene Length723 bp 
Protein Length107 aa 
Translation table12 
GC content39% 
IMG OID640391380 
Productpredicted protein 
Protein accessionXP_001385866 
Protein GI126138686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.249288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.138165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAACGCTGTA GCTCCAAGCA ACCTGGAAGA ATATATATAT AAAAATGTCT AGAGCCATAT 
TACCATTCAC AGAAGCCAAC TCTAAGAGGG TGGCATCTTT GTTCAGACAA GCTTTGAGAA
CCGCATTCGA CAGCTCATTG AAGTTCGATG CCTATAGAGC AGAAACCATA AAGATCAGAG
CACAATTTGA GGCCAATAAG CACATATCTG ATCCAACTGA GTTGGAAAGC GTCATTGCTG
CAACCAGGGC TAAGTTGGCT GAATATGCCC ACCCTGACCC ATACTTCCCA CCATGCAGAC
CAGGTGGTAC CAAGTACCAA AGAAACATTC CAGTTGCAAG AGAACCTCTT GTCCCAGGTG
ACTGGTAATC AACAAATAGG CATTCAGCGA TGTGTTCGAG GTTTATCTGA TACACCTACG
CTGTCGGACC TAGGCTAAAT TTTGTTTTCT AAATGAACTC CAAATCATTA GCGCTGGTCC
TTTCTAGCAT TCATACAAGG CGTAAGAATT ATGAATAGTC AAGTAATTAT TGACACTCAT
ATTTAAGCGA ACTTTACTGA TCAATAAGGC TCTTCTGTCC ATTATTTGTA TCTCTCTTCT
TAGACTGGTA TTACCTATTG TAGCTGTTAT ATCAGTATGT TCCTGAATAA GGCATGACTC
ATTCAAGTAC ATGTACATTT AAGGATACTT TCTTTGTATA AAAATAATAT AAACAATTTC
TAG
 
Protein sequence
MSRAILPFTE ANSKRVASLF RQALRTAFDS SLKFDAYRAE TIKIRAQFEA NKHISDPTEL 
ESVIAATRAK LAEYAHPDPY FPPCRPGGTK YQRNIPVARE PLVPGDW