| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_79118 |
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| Symbol | TPS2 |
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| ID | 4840387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 780801 |
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| End bp | 783569 |
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| Gene Length | 2769 bp |
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| Protein Length | 877 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391702 |
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| Product | threalose-6-phosphate phosphatase |
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| Protein accession | XP_001385509 |
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| Protein GI | 150866040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase
[COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA AGTTCGCCTA TCCTTCGGAC TCCACCATAA TATCGCCAGC AGACTATGCC
AACAATTCCA AGATCAAGCT CTCAGGTAGA GTGTTGAACG TGATGACGTC GTTGCCGTCG
CAGATCTACA AGTGCCACGA CCCCAAGACC CACGAGTATA TTTGGGATGT AGAGCCAGTA
AGAGGGAACT CTGCTCTCTA CTCCTCGCAG TACTTTCTAG ACCAGCACAC AGACTGGGAA
ACCCATTTGA TTGCTTGGAC AGGCGAATTG ATCAACAACA CCAATCTTCT GGCCAATGGC
GAAAACATCC AAGACGATCC ACTCTACTTG GATGATAAGG AAAAACAGGA GTTGGAAAAG
AAGTTGAGAA AGGCTAACAA CTCGGACAAC ATCCACCCAG TTTGGCTCTT GAGACGAGAC
CAGGAAAGAT GGAGAAAGTA TGCCGAAAAC GTCCTCTGGC CAGTTTTCCA TTACATCCAG
GGTCAGCCTT CAAACGGTAA AGCCGAGGCT GATGCCTGGC ACGATTATGT CAAATTCAAC
GAAGTCTACT GCAACAAGAT CAAATCCGTG TATAAGCCTG GAGATATAAT ATGGATCCAC
GACTATTATT TATTGTTGCT TCCGCAATTG TTGCGGATGG AGTTTCCGGA TGCGTATATC
GGACTTTACG TCCATGCTCC ATTCCCATCG TCAGAGTATT TTCGGTGTCT TTCGAAGAGA
TCGCAGTTGT TGGATGGCAT GTTGGGAGCT GACAAGATCG CCTTTCAATC TGACTCTTTC
CAACGCCACT TTCTTTCTTG TTGCTCTCGT CTCCTTGGTT ATGAAGTCAC TTCTAACAAG
ATCTTGGCCT ATGGTACAGC CATCTCTGTA GAGACTTTAC CAATAGGTAT CGATACCAAG
AAGACAGAAA ATGATGCATT TGAACCAGGT ATCGAGGTTA AAGTCAAGGC TCTAAAAGAA
ATCTACACGG GAAAGAAGAT CATTGTAGGT CGAGACAGAT TGGACAAGGT CCGTGGTGTG
GTTCAGAAGT TACAGGCGTT CGAGATGTTT TTGCAGATGT ACCCAGAATG GAGAGACAAA
GTTGTGTTGA TTCAAGTCCT GAGTCCGGGC TACTCTCATT CGGCCAATGT AGAGAAAAAA
GTAACTGAGT TGGTAAACCG TATCAACAGC CAGTTTGGTA ACTTGAACTA TACGCCTGTA
TTGCATTACC AGATTAGAAT CGAAAAGGAC GAGTACTTTG CTTTACTTAG AGTAGCCGAT
TTGGCATTAG TTACTTCTGT ACGTGATGGA ATGAGTACCA CGTCGCTAGA ATTCGTCATT
TGTCAGAAAG AAAATAGTTC TCCCTTGATA TTGTCCGAAT TCACTGGCAC TGCCTCTGTT
TTGAGAGAAT CGATCTTGGT GAATCCTTGG GATTCAGTAG GAATTGCTAG AACCATCAAC
GACTGCCTCT CAATGTCTGA TGACGCAAAG ACCGATTTGG AAGGAAGATT GTATAAGCAG
GTTATTTCGA ATACCATTCA GAGCTGGTCT TCTACCTTTT TGTCTCACTT GATTGAACAC
GTTTCTGAAA CTCACACTTT CCATTATACT CCAGCTTTGA ACAGACCATT GTTGTACAAT
AGCTATGCCA AATCAGAGAG AAGATTATTT TTGTTTGACT ATGACGGAAC TTTAACTCCT
ATAGTCAAAG ACCCAGCTGC TGCCATTCCA TCTTCTCGAT TGAACCAAAT TTTGGATGCA
TTGTCTGCTG ATCCAAAGAA TCAGATCTGG GTGATTTCAG GTAGAGACCA GGCGTTCTTG
GACAAGTGGT TGGGATCGAA GAATGTTGGA TTTTCTGCTG AACACGGCTG TTTCATGAAA
GATATTGATT CTAAGGAATG GGTGAACTTG GCTGAATCTT TTGACATGTC GTGGCAGCAG
AAGGTGGATA GCGTTTACAG GTACTACACG GAAAGAACGC CGGGTTCTAA TATCGAGAGG
AAGAAAGTTG CTTTGACATG GCATTACCGT AGAGCCGATC CAGAGCTTGG ACGGTTTCAG
GCAGCAAAGT GCTTTCAACA ATTGAAGGAC ACAGTTGCCA AAGAATACGA CGTGGAAATC
ATGGAAGGTA AGGCTAATAT AGAAGTTAGA CCCAAGTTCC TCAACAAGGG CGAGATTGTC
AGACGGTTGG TATTGAACCC ACATGGATCT AAATTGGACA CCCATATCTC GTCCAAGGGA
TCAGCAGATA TTTCAGTTGC AGACTTACCA GATTTCATCT TATGTCTAGG AGACGACTTG
ACTGATGAAG ATATGTTCAG AGCGCTTAAG GAGATTGAGG ATGACTGGAC TTCGAAGGAG
TTTCCTAAGA ACCAGTTTGG TTCCTATGGT GTATATCCAG TTGCTGTTGG TCCTGCTTCT
AAGCAGACTA TTGCTACATC CCACTTGAAC GAGCCTTCGC AGGTTTTAGA GACTTTGGGG
TTGTTGGCTG GTCAAGTGTC GTTGTTTGAG AGTGCTGGCA CTGTTGATTT AGACGATAGA
GGTCATGTGG CGAATAGTCC TTCGTCAGAA AGATCTAAGA CGGCCATTAA AGAAGCAGCA
CTTCGCCGCA AGGTCAGCTT AAGCAAGGTG ATTGAATCCA AAGAGAAAAT CTAATACTTC
AATACTATAT ACCAGGAAGC TAGACGTAAG ATTATGGTAT GAGGGAGTGG TTTTACATGC
TATTAGACAG CAACTTACAC AATTTTTAAG TAGAAGCAAA GTAAAGTAAT AAACGAATAT
AAACTGGTA
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| Protein sequence | METKFAYPSD STIISPADYA NNSKIKLSGR VLNVMTSLPS QIYKCHDPKT HEYIWDVEPV
RGNSALYSSQ YFLDQHTDWE THLIAWTGEL INNTNLSANG ENIQDDPLYL DDKEKQELEK
KLRKANNSDN IHPVWLLRRD QERWRKYAEN VLWPVFHYIQ GQPSNGKAEA DAWHDYVKFN
EVYCNKIKSV YKPGDIIWIH DYYLLLLPQL LRMEFPDAYI GLYVHAPFPS SEYFRCLSKR
SQLLDGMLGA DKIAFQSDSF QRHFLSCCSR LLGYEVTSNK ILAYGTAISV ETLPIGIDTK
KTENDAFEPG IEVKVKALKE IYTGKKIIVG RDRLDKVRGV VQKLQAFEMF LQMYPEWRDK
VVLIQVSSPG YSHSANVEKK VTELVNRINS QFGNLNYTPV LHYQIRIEKD EYFALLRVAD
LALVTSVRDG MSTTSLEFVI CQKENSSPLI LSEFTGTASV LRESILVNPW DSVGIARTIN
DCLSMSDDAK TDLEGRLYKQ VISNTIQSWS STFLSHLIEH VSETHTFHYT PALNRPLLYN
SYAKSERRLF LFDYDGTLTP IVKDPAAAIP SSRLNQILDA LSADPKNQIW VISGRDQAFL
DKWLGSKNVG FSAEHGCFMK DIDSKEWVNL AESFDMSWQQ KVDSVYRYYT ERTPGSNIER
KKVALTWHYR RADPELGRFQ AAKCFQQLKD TVAKEYDVEI MEGKANIEVR PKFLNKGEIV
RRLVLNPHGS KLDTHISSKG SADISVADLP DFILCLGDDL TDEDMFRALK EIEDDWTSKE
FPKNQFGSYG VYPVAVGPAS KQTIATSHLN EPSQVLETLG LLAGQVSLFE SAGTVDLDDR
GHVANSPSSE RSKTAIKEAA LRRKVSLSKV IESKEKI
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