Gene PICST_79040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_79040 
SymbolESS1.1 
ID4840013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp564375 
End bp565030 
Gene Length656 bp 
Protein Length177 aa 
Translation table12 
GC content43% 
IMG OID640391328 
ProductPeptidyl-prolyl cis-trans isomerase 
Protein accessionXP_001385798 
Protein GI150866261 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.020064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGA CTGCTACTGG ATTACCACCT GGATGGGCCA TTCGTGTTTC TCGTACGCAC 
AACAAAGAAT ATTTCTTAAA CCAAGCTACG TCTGAATCTA CTTGGGAAGC ACCATTTGGA
AGTGATGATG CTAAGTTGGC TGAATATTTG AAGCATTTCA GAGCCAATGG CAACAAGCCT
GTTGTTCAGG ACGACGGCAA GGTGCGTGTA TCTCATTTAT TGATAAAGAA TGTTCAATCC
AGAAAGCCCA GATCGTGGAA GTCGCCTGAT GGTATTACCT TGAGTCGCGA CGAAGCCATT
CTGATCTTGA AGAAGCACCA AGCTAGAATC TTGAATGGTG AGATCAAGTT GAGTGAATTG
GCCGAGACTG AAAGCGACTG TTCTTCGCAT TCACAAGGTG GAGACTTGGG ATTCTTTGGC
AAGGGCCAGA TGCAACCTAA GTTCGAAGAG GCTGCCTACG GCTTGAATGT TGGTGAAATC
AGTGACATTA TTGAGACCGA CTCTGGAGTA CATATTTTAC AGAGAACGGG ATGAGAAACA
ACACGAAAAT TACAAGCAGA GAAAGGAATT GACGGGAGAG TCCTGAATCG AAAGATTTGG
TTGTCACCAT AATATAGTAT AAAAGTATTG ACATTTACAA TGTAAGTTTT TAGCAG
 
Protein sequence
MSKTATGLPP GWAIRVSRTH NKEYFLNQAT SESTWEAPFG SDDAKLAEYL KHFRANGNKP 
VVQDDGKVRV SHLLIKNVQS RKPRSWKSPD GITLSRDEAI SILKKHQARI LNGEIKLSEL
AETESDCSSH SQGGDLGFFG KGQMQPKFEE AAYGLNVGEI SDIIETDSGV HILQRTG