Gene PICST_78946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_78946 
SymbolDIC1 
ID4839959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp885489 
End bp886493 
Gene Length1005 bp 
Protein Length270 aa 
Translation table12 
GC content39% 
IMG OID640391274 
Productmitochondrial dicarboxylate transport protein 
Protein accessionXP_001385868 
Protein GI126138690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.170378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.239614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCTCCTAAT ACGAATAAGG TCAAGTATCC GTATGTTTCA TTTGTTCTCT AGATTATGGT 
CGACTTTATT TACTAACATT TCTCGTAGAT TTTGGTATGG GGGTGCTGCA AGTATGATAG
CATGCTTGGT AACGCATCCA TTGGACCTTG CTAAAGTCCG TTTGCAGACA GCCACTATTC
CAGGACAATC TTTAATATCT ATGATTTACC AAATTATAAG CAAGGAAGGA TTTTTCAAAA
TCTACTCCGG TTTGACCGCT TCCCTATTAA GGCAGGCAAC ATATTCAACT ACTAGATTTG
GAGTCTATGA ATTTCTCAAA GAAAAATATG TTGATATGAC AGACAACCCT AAGCCATCGA
CAGCTGTATT GCTTCCTATG TCTATGACTG CAGGTGCTTT GGGAGGTTTG GTTGGTAATC
CTTCTGATGT CGTTAACATC AGAATGCAAA ATGATTCAAC TTTGCCAGTA GAGCAAAGAA
GAAATTATAG GAATGCATTT GACGGTATCT ACAGAATTTG CAAAGAGGAA AATCCTGGCT
CCTTATTCAG AGGGTTGGCT CCCAATTTGG TTCGTGGAGT CTTGATGACA GCTTCTCAAG
TCGTTACTTA TGACATAGCT AAGAATCTCC TTGTGGATCA TGTTCATCTT GATCCGACCA
AAAAATCCAC TCATTTCAGT GCATCATTGT TAGCAGGTTT AGTTGCAACA ACTGTTTGTT
CACCTGCGGA TGTAGTAAAG ACAAGAATTA TGAACGCCAA GGGTACTGAT GGTAATCCAA
TTACAATTTT GACTTCGGCT GTGAAGAATG AAGGAGTGGG CTTCATGTTT AGAGGCTGGT
TGCCATCGTT TATTAGATTG GGGCCACATA CAATTGTTAC TTTCTTGGCT CTTGAACAAC
TAAGAAAATA CAAATTGGGA ATGTGAAGTA AAGGAGACTT GCCAGTTGTT TATTTTCATA
CATTGCATAG GTATTATAGA GAAATATATT CATTTGAGAG ACCTT
 
Protein sequence
MIACLVTHPL DLAKVRLQTA TIPGQSLISM IYQIISKEGF FKIYSGLTAS LLRQATYSTT 
RFGVYEFLKE KYVDMTDNPK PSTAVLLPMS MTAGALGGLV GNPSDVVNIR MQNDSTLPVE
QRRNYRNAFD GIYRICKEEN PGSLFRGLAP NLVRGVLMTA SQVVTYDIAK NLLVDHVHLD
PTKKSTHFSA SLLAGLVATT VCSPADVVKT RIMNAKGTDG NPITILTSAV KNEGVGFMFR
GWLPSFIRLG PHTIVTFLAL EQLRKYKLGM