Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_78871 |
Symbol | |
ID | 4840370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 805279 |
End bp | 806019 |
Gene Length | 741 bp |
Protein Length | 114 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391685 |
Product | predicted protein |
Protein accession | XP_001385852 |
Protein GI | 126138658 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.956921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TATCAGGCTC CAAAATACCC AATTGTACTT TGCCACGGAT TTTCTGGTTT TGACAAATTA ACCTTTTTGC CGAGAATCTC CGCCTCTGAA AAGGCGGTAG AAGTAGCTAA AAACAACCTA GAGAAGCTTC TTAATGAAGG TGTTCAGCTA GACTATTGGC ACGGAATCAA AGAAGCTTTA GGGAATATTG GAAGCAAAGT TCTAATAGCT AAAGTTCCGC CATTTGGAAG GATCGAACAT CGTGCTAGAA CACTTGAACA GTATATAATA CAGCAATGCG ATATTCTTCG AAAGCAAGAA CTGAAATCTA CCATCTATCG ACATCTAGAT CTTCAAGATG GGCATTCGAG TGATAGATTT CACACATTCA ATGAGATCAA TGAACCGATC AAAGTGAACA TGATAAGTCA CTCAATGGGA GGTCTAGATA GTCGATACTT GATATCCAAG CTTCAAAAAG AGGATTCCCC AAAACCTTAT AAAGTAGTCA GTTTAACCAC CATTGCTACA CCTCACCATG GATCAGAGTG TGCAGACTTC GTGGAGAATT TAGTGGGGAA TAGTAAGATA TTGAGGTCAA TGTGTCCAGA AGCTATTTTC GAATTGACCA CTTCATATGC TAAAAAGTTC AACGACGAAG TAGTTGACGA TCCAAGTGTC AAATACTTTT CCTATGGGGC TAAGTTTGAT CCCAGATGGT TCAGTTTATT CAATCTCACG TGGCACATGC TTCGATATGA A
|
Protein sequence | MISHSMGGLD SRYLISKLQK EDSPKPYKVV SLTTIATPHH GSECADFVEN LVGNSKILRS MCPEAIFELT TSYAKKFNDE VVDDPSVKYF SYGAKFDPRW FSLFNLTWHM LRYE
|
| |