| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78783 |
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| Symbol | PRB2 |
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| ID | 4839803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1293857 |
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| End bp | 1295883 |
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| Gene Length | 2027 bp |
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| Protein Length | 544 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640391118 |
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| Product | vacuolar protease B |
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| Protein accession | XP_001385945 |
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| Protein GI | 126138844 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0089514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACGGTTTTGG CTGTATCTCG GTAAGCACTG GTTCCTATAT CTGCCATCTG TTACTGCTGT
TGTTGCTGCT CATATCTACT GCTTTTCTGA ACTTTTCTTC TTTGAAACTC GTTAAATTTG
GACTACTTCT GTTCATTTTC TGCTTAGTAT ATCTGGTCTA TACTATCTGT CACTCAATTA
GTCTAGTCTG TCTACTCCCG TATTCGAGAA CTTCTCCGGA TACAATCTGT TAACTATTAA
CTACATAAAA ATCTATCACT ATGTTGCTTT CCAAGTCGGT TGCTGTTTCC ATCCTCGTTG
CCATGGGCGT TGAGGCTTTG GTTCTTCCCT CTTTTGATGA TATCGTCGAC GTGTTTGGCG
TCGAGAAGGC CGTTCCAAAA GTCAACGAAA AGACCCAGAA CGTCTTGGGC TTGAAGGAAG
CCGTCGACGG CCTCAAGGAC GCTGTTGATG GAGCCAAGAA AGCTGTGGCT CCCTTCCTTG
CCGGTGCCAG AGACCTCATT CCCCACAGAT ACATCGTTGT CTTGAAGGAG TCTGCCTCTG
CCGACGAAAC TGCCTTCCAC AAGGAATGGG TTGCCTTGAA GCACACCGAG TCGTTGGCTG
GTCTCGACGA AAGTCACGAT TTTTTCGCTT CCACCAAGGA CTTCAAGACT GAGGGCGGTA
TTGTTGACTC GTTTGACATT GGCTCCATCG TCAAGGGTTA CTCCGGTTTC TTCCTTGAGT
CCACCATCGA CTTGATTCGT CAGAACCCAT TGGTTGCTTT CGTTGAACAA GACTCCATGG
TCTATGCCTC GGAATTCGAA GTTGAAAAGG GTGCTCCATG GGGTTTGGCC AGAGTCTCTC
ACAGAGAGCC ATTGACCTTA AGCTCGTTCA ATCAGTACTT GTACGACAAC AACGCTGGTA
AGGGTGTGAC TTCTTACGTC ATCGACACCG GTGTTAACGT CAACCACAAG GAATTCGGTG
GAAGAGCCAA GTGGGGTGCC ACCATTCCTT CTGGTGATGC TGATGTTGAT GGTAATGGTC
ACGGTACCCA CTGTGCTGGT ACCATTGCCT CTTCCGCCTA TGGTGTGGCC AAGGGTGCTG
AAGTTGTCGC TGTCAAGGTG TTGAGATCCA ACGGTTCCGG TTCCATGTCT GATGTAGTTA
AAGGTGTTGA ATTCGCTGCC AATGCCCATT CTGCTGCTGC CAAGGAGGCC AAGAAGGGCT
TCAAGGGTTC CACTGCCAAC ATGTCGTTGG GTGGAGGCAA GTCTCCAGCT TTGGATTTGG
CTGTTAACGC TGCTGTCAAG GCCGGTATCC ATTTCGCTGT TGCTGCTGGT AACGAAAACC
AAGATGCATG TAACACTTCT CCTGCTGCTG CTGAGAACGC CATCACTGTC GGGGCTTCGA
CTCTTGATGA CTCCAGAGCT TACTTCTCTA ACTACGGTAA GTGTGTTGAC ATCTTTGCTC
CAGGTTTGAA TATTGTTTCT ACCTACATTG GTTCCGACAC TGCCACAGCA ACCTTGTCTG
GTACTTCGAT GGCTTCTCCA CACATTGCTG GTTTGTTGTC GTACTTTGTT TCGTTGCAAC
CAGGTGCAGA CTCTGAGTTC TTTGTGGCAG CTAACGGTGT TTCTCCATCC CAGTTGAAGA
AGAACTTGAT TGCCTACGGT TCCACAGGTT TGTTGAGTGA CATCCCTGAA GATGGAACTC
CTAACATCTT GGCTTACAAT GGTGGAGGAC ACAACATATC CGAATTCTGG GGTAAGGATG
CTGGTGCTGA GCTCAAGTCG GCTAAGGTTG ACGCCAGAAT CGCCGACATC GAAGGCAAGA
TTGGTTCCTT GTTATCAAAG GTTGACTCCA AGCAGATTCT TGACGATGTC AAGGCTTTGG
TAGACGTTGC CTATGAAAAG TTGCAGGAAA ACTAGAATAG ACATAGATGG CAGAGATGCT
GTTATGGGTT TTAATTCTGA TTCACCGATT TTTTTCATTT GCGACTGGTT TATGTACGGA
TATGTCGCTA GAGCCTCAGA GCTCTGTAGT ATCAATGTTA TAATAAG
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| Protein sequence | MLLSKSVAVS ILVAMGVEAL VLPSFDDIVD VFGVEKAVPK VNEKTQNVLG LKEAVDGLKD
AVDGAKKAVA PFLAGARDLI PHRYIVVLKE SASADETAFH KEWVALKHTE SLAGLDESHD
FFASTKDFKT EGGIVDSFDI GSIVKGYSGF FLESTIDLIR QNPLVAFVEQ DSMVYASEFE
VEKGAPWGLA RVSHREPLTL SSFNQYLYDN NAGKGVTSYV IDTGVNVNHK EFGGRAKWGA
TIPSGDADVD GNGHGTHCAG TIASSAYGVA KGAEVVAVKV LRSNGSGSMS DVVKGVEFAA
NAHSAAAKEA KKGFKGSTAN MSLGGGKSPA LDLAVNAAVK AGIHFAVAAG NENQDACNTS
PAAAENAITV GASTLDDSRA YFSNYGKCVD IFAPGLNIVS TYIGSDTATA TLSGTSMASP
HIAGLLSYFV SLQPGADSEF FVAANGVSPS QLKKNLIAYG STGLLSDIPE DGTPNILAYN
GGGHNISEFW GKDAGAELKS AKVDARIADI EGKIGSLLSK VDSKQILDDV KALVDVAYEK
LQEN
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