| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78721 |
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| Symbol | GAP1.6 |
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| ID | 4840333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 263311 |
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| End bp | 265261 |
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| Gene Length | 1951 bp |
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| Protein Length | 597 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391648 |
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| Product | amino acid permease |
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| Protein accession | XP_001385389 |
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| Protein GI | 150865961 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | [TIGR00913] amino acid permease (yeast) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00834318 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | AGGACCTAAC CATGCTGTAC GAAAAGGGCA AAAATCCAAG CTCGTTGGAC GAAGAGGCAC
ACAGCTACCG CAATAGCCCC GCCATTCAAG ATGACGATAG AAGCAGTTCC TACAGTAGTG
GATCCTACTA TCTGGAATCA AAAGGTGGTA GCGCTTTCAC CCGTTTCATC GACTCTTTCA
AACCCATCGA CTTAGAAGAA GATGGTATTG ACACCACCAA CATGACTCCT ATGGAGAAAT
CTATTATTGC TAGTGCAAGA CATCCTTTGG CCAGAAGATT AAAGTCTAGG CACTTGCAAA
TGATTGCTAT TGGTGGTTCT ATTGGTACGG GTCTTTTCAT TGGTAGTGGT TACTCGTTGT
ACATGGGTGG TCCAGCCGGT CTTTTGATTG GTTATCTCTT GGTTGGTTAC TCTATGTTGT
GTGTAATCTA TGGTTTAGGT GAACTTTCTG TTCAATTTCC AGTCTCCGGT TCCTTCAATG
CCTACTTCAC CAGATTTGTC GATGACAGTT GGGGTTTCAC CTTAGGTTTA TTGTATGCTA
CATCATGGTT GGTTTCCTTC CCCTCTGAGT TGATTGCCTG TTCTATGACT ATTCAATATT
GGAATACGTC TGTAAATCCT GCCGTTTGGG TTGCAGTATT CTATGTTGTT ATTGTTTCTA
TCAACTTCTT TGGTGTTAAG GGTTATGGTG AAGCTGAATT CTATCTTTCG ATCATCAAGG
TTGTCGCCGT CGTTGGTTTC CTTATTGTTG GTGTCTGTAT TATTTGCGGT GTTGGTGAAG
GTGGATATAT TGGTGGCAGA TACTGGCACA ACCCTGGATC ATTTAACCAT GGCTTCAAAG
GTGTTTGTTC TGTCTTCATT GGTGCTGCCT TCTCCTTTGG TGGTATTGAA TTGGTAGCAT
TGGCTGCTGC TGAAACCAGA AACCCAAGAA AATCTTTGCC AAAGGCAACT AAGCAAGTCT
TCTGGAGAAT TACTATATTC TACATCCTTA CTGCTATCAT CATTGGTTTC TTAGTTCCAT
ACAACAACCC CATGTTATTG AGCGGTAACT CAAGCGAAGA TATCGTTGCT TCTCCATTCG
TTATTGCTAT TCAATCTGGT GGTATTAAAG TGCTTCCACA TATCATGAAC GCTGTTATCT
TGGTTGCAGT TGTCTCTGTT GGTAACTCTT CTGTGTACGG GTGCTCCAGA ACATTGGCTT
CTTTGGCTGT TCAGGGCTTG ATTCCTTCCA TCTTTGGTTA CATTGACAGA GCTGGAAGAC
CTATGGTTGC TATTATGTTT ACTAACTTGG TTGGTTTACT CGGTTTCTTG GTTGCAAGTG
AAAACCAAGG TACTGTTTTT ACTTGGTTCT TTTCCATCTG TTCTTTGGCT GCTTTCTTCA
CCTGGATTGC CATATGTTTC ACACATCTTA GGTGGAGATG GGCTCTTGCT GCTCAGGGTA
GGTCATTAGA TGAAGTTGCA TTCGTGTCGC CATTGGGAAC ATTTGGTTCC TACTCTGGTA
TTTTAATTTT ATCGTTGATT GTTGTCGGTG AAATCTGGAT CTCTATTTGG CCAATTGGTG
AACCAGCTAG CAACATCACA TTCTGGCAAA ACTGTTTGTC CTTGCCATTA ATGCTTGTTT
CTATCATTGC CCACAAGACA TGGTACCGTT CTTGGAACCG TATCATGGTT AAGTTGGAAG
ACGTTGATTT GGATACCGGC AGAAGAGATG TTGACGTCGA ATTATTGAAG CAAGAAATTG
CAGACGAAAG AGAAACACTC AGACAACAAC CATTCTATCT TAAGTTCTAC CACTTCTGGT
GTTAGATGGC TTCAGGGAGC CTCATAATTT TCTTCAATTC ACTTCGTAAC GCATACAGAG
TCTATATTCT AATATCCTAG TCATATCTAC GAATGTCACT TTTCAAGATT CTAATATAAT
AAATAACATT TAATAAAAGT AGAAAAACTA A
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| Protein sequence | MSYEKGKNPS SLDEEAHSYR NSPAIQDDDR SSSYSSGSYY SESKGGSAFT RFIDSFKPID
LEEDGIDTTN MTPMEKSIIA SARHPLARRL KSRHLQMIAI GGSIGTGLFI GSGYSLYMGG
PAGLLIGYLL VGYSMLCVIY GLGELSVQFP VSGSFNAYFT RFVDDSWGFT LGLLYATSWL
VSFPSELIAC SMTIQYWNTS VNPAVWVAVF YVVIVSINFF GVKGYGEAEF YLSIIKVVAV
VGFLIVGVCI ICGVGEGGYI GGRYWHNPGS FNHGFKGVCS VFIGAAFSFG GIELVALAAA
ETRNPRKSLP KATKQVFWRI TIFYILTAII IGFLVPYNNP MLLSGNSSED IVASPFVIAI
QSGGIKVLPH IMNAVILVAV VSVGNSSVYG CSRTLASLAV QGLIPSIFGY IDRAGRPMVA
IMFTNLVGLL GFLVASENQG TVFTWFFSIC SLAAFFTWIA ICFTHLRWRW ALAAQGRSLD
EVAFVSPLGT FGSYSGILIL SLIVVGEIWI SIWPIGEPAS NITFWQNCLS LPLMLVSIIA
HKTWYRSWNR IMVKLEDVDL DTGRRDVDVE LLKQEIADER ETLRQQPFYL KFYHFWC
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