Gene PICST_73488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_73488 
Symbol 
ID4839784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp643520 
End bp644023 
Gene Length504 bp 
Protein Length131 aa 
Translation table12 
GC content42% 
IMG OID640391099 
Productpredicted protein 
Protein accessionXP_001385824 
Protein GI126138602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.237035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.334046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TATAACTATC CACAATGGCC CCACCAAAAG CTGAAAAGAA GCCTGCCTCT AAAGCCCCAG 
CTGAAAAGAA GCCAGCTGCT AAGAAGACTG CCTCTTCTAC CGACGCTAAG AAGAGAACCA
AGACCAGAAA GGAAACTTAC TCTTCGTACA TCTACAAGGT CTTGAAGCAA ACTCACCCAG
ACACCGGTAT TTCTCAAAAG GCCATGTCCA TCATGAACTC CTTTGTTAAC GATATCTTTG
AAAGAATCGC TTCCGAAGCT TCCAAGTTGG CTGCCTACAA CAAGAAGTCC ACCATCTCTG
CCAGAGAAAT CCAAACTGCC GTTAGATTGA TCTTGCCAGG TGAATTGGCT AAGCACGCTG
TTTCTGAAGG AACTAGAGCT GTCACCAAAT ACTCTTCTGC TTCCAACTAG GCGGACTAGT
GTTTCAATTC TTTTTCTTCA TCGTATTTTT AATGTTTGTA TAGGTTGAGT GTATATTAGT
CTTAATGAAA GGAATAGTTA TTAT
 
Protein sequence
MAPPKAEKKP ASKAPAEKKP AAKKTASSTD AKKRTKTRKE TYSSYIYKVL KQTHPDTGIS 
QKAMSIMNSF VNDIFERIAS EASKLAAYNK KSTISAREIQ TAVRLILPGE LAKHAVSEGT
RAVTKYSSAS N