Gene PICST_73371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_73371 
SymbolENA5 
ID4839807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1315458 
End bp1319279 
Gene Length3822 bp 
Protein Length990 aa 
Translation table12 
GC content43% 
IMG OID640391122 
ProductNa+ ATPase 
Protein accessionXP_001385604 
Protein GI150866115 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.782577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.684178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGACACATT TGTTCCTATT TATTGTAATT CTGTTTGGGA AGTTTTATCG CTAACGCCTT 
GAAATACTGA ATATCTCACT GTGAAATCTT AAACTAGAAT CTAGTTTACC TTATCTAGTC
TATTCAATTT CCCAGCCTTT CACCAGACTT TTGCTACAAA ACTCTCCGGT GAACCAGAAG
CTACTCTCTA TCGGAATTCA CGTCTTATTT GGAACTATTC TGTTCTGATC GTAGAACTAC
CCCGTTTGAA GTTATTGAAA ATAAAGTCCT CTAGCTCAAA CAACGAATTC AACAATGACT
CGTCAACTAG CCAAGGCTAT GAAGATGAAG GCTGTCAAAA GCCGATTGCT GAACTCAAGA
ACCTAAACAC TCGTGTAACT ACGACTGTCG CTGACGAAAA GAACCTCAGG CCCCCTATCG
ATAACGAAGC TTACAGACTC ACTGTACTGC AAGTAGCTTC TTTGTTCAAT GTCGACATTG
ACGTTGGACT TTCTGAAGCT CAGGTAAAGA GTCAGTTCGA AAAGTTCGGC CCGAACAGCT
TGGGAGCCGA TGAAAAAATC TCGATGGCGA AAATCTTGGC CCACCAAGTA TTCAACGCCA
TGGTTTTGAT TTTAATCATT TCTTTGGTGA TTGCTTTGGC AATCAGAGAT TGGATCTCTG
GTGGTGTGAT TGGCTTCGTA GTCTTTATCA ATGTGTTTGT AGGTTTTATT CAGGAGTACA
AGGCCGAAAA AACAATGAAT TCATTGAAGT CCTTGTCTTC TCCTACTGCC AAAGTGTTGA
GAGAGGGTCA CTCAATCGAT ATTGACTCCG AAAACGTAGT TCCTGGTGAT ATTGTAATCA
TAGGCGCGGG AGACACGGTT CCGGCCGATT TGAGATTGTT CAATGCCGTG AACTTGGAAA
CAGATGAGGC ATTGTTGACC GGTGAATCGT TGCCCGTAGC AAAGGTCCAC ACTGAAGTCT
ACACTGACGA TGTTCCTGTT CCAGTGGGAG ACCGTTTGAA CATGGCCTTT TCTTCTTCTG
TAGTAAGCAA GGGAAGAGGA TCTGGAATTG TTGTTTCTAC TGGTTTACAT ACTGAAATCG
GCAACATTGC CGACTCCTTG AAGAACGGTG ACGATAAGCT AATTGTCAAG GTCGACAAGT
CGACCAACCC AGGTTTCAAA GACTACTTCT TTGCTGCTCT GAAGTCTACC TACAACATAG
TCATGAATGT ATTGGGTACC AATGTCGGTA CACCTTTGCA GAGGAAGTTG TCTTGGTTGG
CTATCTTCTT GTTCTGGGTG GCTGTCTTGT TTGCTATTGT AGTTATGGCT TCACAGAAGA
TGAGAGTCAC CAAAAATGTT GCCATCTATG CCATTTGTGT AGCTCTTTCT ATGATTCCTT
CTTCTTTGAT TGTCGTCTTG ACCATTACCA TGGCTATTGG AGCCCAAGTA ATGGTGACCA
AGAATGTCAT TGTTAGAAAG TTGGACTCGT TGGAAGCCTT GGGTGGTATC AACGATATCT
GCTCTGACAA GACTGGAACT TTGACCATGG GTAAGATGAT TGCCAGAAAG GTCTGGATTC
CTACTTTGGG TACGTATATG GTTCAAAACT CTAACGAGCC ATTTAATCCA ACAGTTGGAG
AACTTGTTTA CAACGAATCT TCGCCAAAGG AAATCAAAGA TAGTGACGAA GAAGCGGATT
ATATTCCCAA CTTTCCTGTT CCACATCCAA ACTTGTTCCT GAAGTGGATT GACACTGCTA
TTTTGGCCAA CATTGCCTCT GTCAAATTGT CTCCTGTTGC AAATTCTGAC AAATTGGAAT
GGCAAGCTCA TGGTGATGCT ACTGAAATCG CCATCAATGT CTTCACCACC AGGTTGGGCT
ACAGCAGAGA TTCGATGATA GAGGATCAAG AATTGGAACA TTTAGCCGAA TTTCCTTTTG
ACTCCAGCAT TAAGAGAATG TCTACCGTTT ACGCCAATAC TAAGTCGCTG GTTTCCACCG
TATACACCAA AGGTGCTGTG GAAAGAGTCT TGAGTATTTG TAAGTACTGG TACAAGAATA
AAGATGAGTT GATTCCTCTT TCCGAGGAAG ACAAGAACGT TATTGAGGCC AACATGGCTG
TGTTGTCGTC TGAAGGTTTG AGAGTTTTGG CTTTTGCTCA ACGTCAAATC AACACTGCTA
AGGAAGACGT CAACAAGAGG GATGATGTCG AGCAGAATTT GGTTTTCTTG GGTTTGATCG
GTATCTATGA TCCTCCTAGA CCAGAGAGCG CCAGATCCGT TAAGTTGTGT CACAAGGCTG
GTATAAATGT TCACATGTTG ACTGGTGATC ATCCTGGTAC AGCCAGAGCA ATAGCTCAGG
AAGTTGGGAT TTTGCCTCAC AATTTGTACC ACTACAGTGA AGAGGTAGTT AGAGTTATGG
TGATGACAGC CAATGAGTTT GACAGTTTGT CGGATGAAGA AGTGGACAAT TTGCCCGTTT
TGCCATTGGT TATTGCTAGA TGTGCTCCAC AGACCAAGGT TCGTATGATT GAAGCCTTGC
ATCGCCGTAA GAAGTTTGTG GCAATGACAG GTGATGGTGT CAACGACTCT CCTTCTTTAA
AGAAAGCCGA TGTTGGCATT GCCATGGGTC TCAATGGTTC AGATGTCGCT AAAGATGCTG
CTGATATTGT GTTGACCGAT GATAATTTTG CTTCTATCTT GAATGCCATT GAAGAAGGTA
GAAGAATGTC ATCCAACATT CAGAAGTTTG TGTTGCAGTT GTTGGCTGAA AATGTCGCTC
AGGCCATCTA CTTGATGGTT GGTTTGGCAT TCATGGACAA GTCTGGCTAC TCTGTTTTCC
CCTTGGCCCC TGTTGAAGTA TTGTGGATTA TTGTTGTCAC CTCCTGCTTC CCGGCAATGG
GTTTGGGTCA AGAAAAAGCC CTGGACGATA TCTTGGATTT GCCTCCCAAC AGCACCATAT
TCACCTGGGA AGTCATCATC GACATGTGTG CTTATGGTTT CTGGATGGCT GTCTGTTGTC
TTATCTGTTT CGTTGTCATT GTCTTCGGTA AAGGAAATGG CTATCTTGGA ATTGACTGCA
ACACTGGGTC TGGTTCTGGC TGTGACTTGG TATTCCAGGG TAGATCCGGT GCTTTTGCTG
CCTTTACCTG GTGTGCCTTG TTTTTGAGTT GGGAATGTTT GCACATGAGA TTGTCGTTCT
TCAAGATGAG ACCCGAGTCC GAGCACTCAT GGTGGAAGCA GTTGGGTATG GATCTCTGGG
AAAACCAGTT CTTGTTCTGG TCTATCATCT TTGGATTTGT TTCGGTGTTT CCCGTCGTTT
ACATCCCTGT TATCAACGAC AAGGTGTTCT TGCATGGTCC TATCGGCTAC GAATGGGGTC
TCTCTTTTGC TTTCACCATC TTGTTTTTCT TGGGCGCCGA AGGATGGAAG TGGTTCAAGA
GGGTCTACTA CAGAAAGACG GCTGCCAGAA ACCCTGAATA CGAGTTGGAG AGAAATGATC
CATTCCAAAA GTACGCCTCA TTCTCTAGAA GCAACACCGT GGCAGTCAAT GTTTGAAGAC
ATTAGCTGGT GTGCCCTGGG GTCTGCTCTT TTTTGGCAAT TCCAACAATA TCGCTAACGT
CCAAAGTGTG ATTTTCTTAT TTAAATTTTT TGCAAGTCCG GTAGCTTATA CCGTTGTTAA
GTTTTCTACA GTTTTCTAAG GATATCACCT AGTTTTTTAG GTAATACCAT CCGGAGGTTT
TTATCTTAGG ATTTCCTCCA CCTTTCAGTA TGGATCTTAG GAAAATTTAT GTACTTTGTA
GTAGATAGGT TGGACTTTAG TTGTAATACA TGCCATTTCG TT
 
Protein sequence
MAKILAHQVF NAMVLILIIS LVIALAIRDW ISGGVIGFVV FINVFVGFIQ EYKAEKTMNS 
LKSLSSPTAK VLREGHSIDI DSENVVPGDI VIIGAGDTVP ADLRLFNAVN LETDEALLTG
ESLPVAKVHT EVYTDDVPVP VGDRLNMAFS SSVVSKGRGS GIVVSTGLHT EIGNIADSLK
NGDDKLIVKV DKSTNPGFKD YFFAASKSTY NIVMNVLGTN VGTPLQRKLS WLAIFLFWVA
VLFAIVVMAS QKMRVTKNVA IYAICVALSM IPSSLIVVLT ITMAIGAQVM VTKNVIVRKL
DSLEALGGIN DICSDKTGTL TMGKMIARKV WIPTLGTYMV QNSNEPFNPT VGELVYNESS
PKEIKDSDEE ADYIPNFPVP HPNLFSKWID TAILANIASV KLSPVANSDK LEWQAHGDAT
EIAINVFTTR LGYSRDSMIE DQELEHLAEF PFDSSIKRMS TVYANTKSSV STVYTKGAVE
RVLSICKYWY KNKDELIPLS EEDKNVIEAN MAVLSSEGLR VLAFAQRQIN TAKEDVNKRD
DVEQNLVFLG LIGIYDPPRP ESARSVKLCH KAGINVHMLT GDHPGTARAI AQEVGILPHN
LYHYSEEVVR VMVMTANEFD SLSDEEVDNL PVLPLVIARC APQTKVRMIE ALHRRKKFVA
MTGDGVNDSP SLKKADVGIA MGLNGSDVAK DAADIVLTDD NFASILNAIE EGRRMSSNIQ
KFVLQLLAEN VAQAIYLMVG LAFMDKSGYS VFPLAPVEVL WIIVVTSCFP AMGLGQEKAS
DDILDLPPNS TIFTWEVIID MCAYGFWMAV CCLICFVVIV FGKGNGYLGI DCNTGSGSGC
DLVFQGRSGA FAAFTWCALF LSWECLHMRL SFFKMRPESE HSWWKQLGMD LWENQFLFWS
IIFGFVSVFP VVYIPVINDK VFLHGPIGYE WGLSFAFTIL FFLGAEGWKW FKRVYYRKTA
ARNPEYELER NDPFQKYASF SRSNTVAVNV