| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68215 |
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| Symbol | YVC1 |
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| ID | 4840312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1613532 |
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| End bp | 1615601 |
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| Gene Length | 2070 bp |
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| Protein Length | 662 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391627 |
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| Product | vacuolar cation channel |
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| Protein accession | XP_001385668 |
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| Protein GI | 150866168 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGG ACCTCGAGGG TGCTGTGCTT ATCCCAAATT CAGAGGCTCC TCCCCTCTTC
ACGGACACGT TTTGTCCCAA CTCGCGCCAG ACTCTTAGAA TCTGCTTGAA CTTGAAGATC
TTGATCGACA AGGTTATCCC CATTGTCTTC GACGAAAAAG ATGTTACTGC TGCCGGTTCT
CCCATTCTCA ACTCCAACGT CATCGACTTG GTCTACCGTG CTGCTGGAGG TAAAGGTGAT
GGTAAAAAAG GCACCACCTC GGCTCGTTAT AGGGCTGCTC TCATCTTCAG TTTGTTGAAG
GTCTGCGATT GGTACTGGCA ACAGGCTGAA AACGAATTGA CAGACAATGC CTTGTACTCA
CTTCGTGCCG TTGCTGCACA GACATTGGCT GCTACTTTAA TTGAAAGGGA AGCTGACGAC
GAGTACTTGT TCCTCGGTAT GTTGTGTCAC AGATACACCA TCAATTTGAA TGGTGTTGAC
TCCGTTCCTG CCAGTGCTTT GGAAATGGCT GTAGACATGC ACTCAACCAT CGTCATCGGA
TCCTCAGGAT ACCAACGTTG TGTCAAGTGG CTCTGGAGAG GTTGGATAGT GCAATCTTCG
ACGGATCCTC ATTCCTATGT CATGTACAAA GGTGTTTCTT CTCACTCTAT CAGAGTGCAC
TTTGACCCCA ATAGAATTAA GACGCCATTG TACCAAAACA TTTTGGAAAT CTTGTTCTCT
GTCATCTATT TGATCTTGTT CACTATCATC TTGAATGGCC ATCAGTATAC TACCTCCGGG
CTTGATGGCT TCGAAGTTTT GTTCTACTTG TTCACCTTAG GTTCTGTCAT TGATGAGTTT
GTCAAGTTCT ACCATGTCGG CTACCATTAC TTGGGGTTCT GGAATGTCTT CAATGATACC
ATGTACACGA TCATTGCCAT CAGTATCGGG TTCAGATTCG CCAGCTTCAA CTCCCACGGT
TCACTCAGAG ACAGATACGA CGAGATGTGC TTCAGAGTAC TTTCTTGTGC TGCTCCCTTC
ATGTGGTCCA GACTCTTGTT GTTTTTGGAT GCCCAAAAAT TTGTCGGGGC TATGATTGTC
GTCATCAAGA CCATGATGAA GGAATCGATT TTGTTCTTTG TTTTGCTTTT TGTCGTCATT
GTTGGTTTCC TTCAAGGATT TCTTGGTTTA GATGCGTCTG ATGGTAAGAG CGAAGCAACG
AGACGTATCT TGATATCTTT GGTCCAAGCC GTTGTAGGTG AGTCCAGTTT CGATGATATG
GGAGAATTGG TTCCTCCATA TGCCTCTGTC CTCTATTACA TATACACCTT CGTCTTGACT
GTTATCTTGA TGAACATCTT GATTGCATTG TACTCTACAG CCTATGCTGC CATCGTTGAG
AATGCAAATG ATGAGTACTT TGCCTTGGTA GCTCAGAAGA CATTGAGATA CATCAGAGCA
CCTGACGAAA ACCTCTACGT ACCTCCTTTC AACTTGGTGG AGTTCTTTGT CATACCTTTC
GGTTTCATTT TGTCGAAAAA TGCCTTCAGA TACCTCAACC ACTATGTAAT GTTGGTCTTG
TACTCTCCAT TGTTGGCCTA CATAACTATG GACGAGTTGT CTAACGCTAG AAGAATCCAA
TATAACAGAT TCAAGGGTTT ACCTGATGAT GCTAACGAAT TGGACACCGA ATGGGACTTG
ACTGACGGTT ACGATGATCT GTCTACTGCT GGAATTGAAG GTATTCAAGA GAGAAACGAC
GAAGTAGCCC GTGACTTGAG AGAGCAAAGG GAAGGTGAAG GCATCGATCC TGAGTTTGCT
ATCGATATCA AGCAATTCCA AAAGGACATT GACGAAGTCG TCAAGCCAGT CCAAGAAGCC
AACAAGATTG GTATCAAGTG GGAGTTCTAC GAGCTCTACC ACAAGATCGA CAAGTTGACC
CAGTTGTTGG AGACTGTTGT GGCTGAAAAT TCTGAGTTGA AGCAGAAGCT TAAGGATTCC
AGTGCTTAGG CTAGATGCCA GAGATACTCT ACAGACTGAA GAGTTGTGTC TAGATTGATT
TTAAAAAAGA CAATAAAAGT GATTTCAGAG
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| Protein sequence | MNSDLEGAVL IPNSEAPPLF TDTFCPNSRQ TLRICLNLKI LIDKVIPIVF DEKDVTAAGS
PILNSNVIDL VYRAAGGKGD GKKGTTSARY RAALIFSLLK VCDWYWQQAE NELTDNALYS
LRAVAAQTLA ATLIEREADD EYLFLGMLCH RYTINLNGVD SVPASALEMA VDMHSTIVIG
SSGYQRCVKW LWRGWIVQSS TDPHSYVMYK GVSSHSIRVH FDPNRIKTPL YQNILEILFS
VIYLILFTII LNGHQYTTSG LDGFEVLFYL FTLGSVIDEF VKFYHVGYHY LGFWNVFNDT
MYTIIAISIG FRFASFNSHG SLRDRYDEMC FRVLSCAAPF MWSRLLLFLD AQKFVGAMIV
VIKTMMKESI LFFVLLFVVI VGFLQGFLGL DASDGKSEAT RRILISLVQA VVGESSFDDM
GELVPPYASV LYYIYTFVLT VILMNILIAL YSTAYAAIVE NANDEYFALV AQKTLRYIRA
PDENLYVPPF NLVEFFVIPF GFILSKNAFR YLNHYVMLVL YSPLLAYITM DELSNARRIQ
YNRFKGLPDD ANELDTEWDL TDGYDDSSTA GIEGIQERND EVARDLREQR EGEGIDPEFA
IDIKQFQKDI DEVVKPVQEA NKIGIKWEFY ELYHKIDKLT QLLETVVAEN SELKQKLKDS
SA
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