| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68166 |
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| Symbol | |
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| ID | 4839805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1299450 |
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| End bp | 1301614 |
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| Gene Length | 2165 bp |
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| Protein Length | 709 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391120 |
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| Product | predicted protein |
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| Protein accession | XP_001385947 |
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| Protein GI | 150866370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5117] Protein involved in the nuclear export of pre-ribosomes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA GAAAGAATAA CGTCAAGGAG CAGGAGAAGA GAAAGAAGGC TAAACAGGAA
AAGGACAGTC TTCTTTCTAC CGGTTTGTTT CAGAACAATA TTGGTGAAGA AAGAGAAAAT
GACTCTAATG TTCCTAACGA TTGGGATAAT GAAGAACAGG ACTATGAATT GAGACCCAGA
AAGCTCAAGA ATTCCGGAAA AGTAGTAGAA GGTTTGCCTA TCAAGACATC AGAAGGTAAA
ATCGAAAGGG TTGTGCGTGA AATAGAGCCC GAAGAAGAAC CTGAGCCAGA ATCAGAGCCA
GAGCCTGAAC AAGAAGTTCC AGAAGAGGAC GAACAGCAAA AGGAAGAAGA GGATGAAGAT
GCCCATCTCA CACCCACAGA ACGTTTGAAC AAGATCAAAG AAGAAGTAGC AGATTTGGCT
TCTAAGCTAA TCGAAGATCC AGAAGAAAAC ATTTCTTGTC TTACTCGTTT GAGAAAGATG
TCAGAATCGC ACAATATTGT CACATCACAG TTGGCAATCA TGGCACTTAT CCCCGTATTC
AAGTCCTTGG CTCCATCTTA TATGATAAGG CCGTTGACCG ATGCCGAAAA GAGAGAAAAA
GTCAGCAGGG AAGTAGCTCG CTTGAGAGCC TATGAACAGT CGTTGGTTTC CAACTATACT
TACTATATCG ACAACTTGGG CAAAATGGCT CGAGTTTCGT ACCTGAACTC TGCTAACAAC
CTGAAGATCA CTCCAGACCA GCTCAAAAAG GGGGCCTTGG CCACAAAGGC GGCCTGTGAA
TTGTGTTTGT CGTCATTGCG TCACTTCAAT TACAGAAATG AAGTATTTTC TATTGTTATC
AGGAGGTTGA ACAAGAGACC TGGTAATCCA GAGGATCTTG AGATCTTCAC GAAGTCGCTC
AGAGTGTTGG AGACTTTGTT GAAAGAGGAT GAAGAAAATG GGGATATCAC GCACGAAGTG
ATCAAGTTGA TGTGCAAGTC CATCAGAGAC AAGAAGTTCA GAGTGGACGA ATCTGTGATT
AACGTCTTTC TTTCCTTGTC TTTATTGGAA GACTACGACC CCAATCACAA TAGGGATGAT
ATGCCTCAGA AGAAGTTGAA GAAGAAGGAC AGAGTTCATT TGTCGAAGAA AGAAAGAAAA
GCCAGAAAGG AAAGGAAGGA AATAGATGAA GAAATGAGGA GAGCTGAACA AGCCATAACA
GTTGAACAGC GTGAAAAGTA CCAAGCGGAA GTGTTGAAAA TGCTCTTGAT GTTGTATTTG
GAGATTTTGA AGGCTGGAAG TCATACTTTA GAATCTGGAA GAAACGATGC TACCTTATTG
ATGGCCTCAG TCTTAGAAGG ATTGGCCCGT TTCGGCCAAA TGGCTAACTT TGACTTGTTA
GGTGACTTCT TGGAAGTGTT GAGAGAAATA ATGGGTGATA TCATAGATGA ACACAATCTC
GGTAACTTTG ATGCCAACAT CGACGATGAA ACCGGAGGAG TGTACGACGG GAAGCAATTG
AGAACCGTGT TGTTGTGTAT CGCCACTTCT TTTTCCTTGA TGTTAAACCA TGGCTCAACC
GGTAGATTGC CTATGACCAT CGACTTGTCC AAGTTTGTGT CGTCTTTATA TCTCATTTTG
GCCGATTTAT CCGTAGATAC TGATTTAGAA TTCAGTCACA AGACGCTCAG ATTGGCCGAT
CCATTGTCGA TGGAACAGGT AGCAGAAAAA CCTGCTGTCA ATGTCTCCAC CAAGGCTGAG
TTGCTCTTGC GTTGTCTTGA CTTCATTTTC TTCCGTTCAA AGAATGGATC AGTAGCGAGG
GCTGCTTCTT TTACTAAGAG ACTTTATCTC ACAGCACTCC AGACTCCAGA AAAGACATCA
CTCGCCACAT TGAAGTTTAT TGGAAAGTTA GTCAGCAGAT ACGATGAAAG CATGAAGGGA
TTGTGGAACA CAGAAGAGAG AATCAGTGGA GAGGGAAGCT ACGTTCTCGG AATAGAAAGA
GATGATCGTG AAATTGAGCT TGAAAGAAGT AATAGTGGAG CTGCCACTTT GTGGGAAAAT
GTCTTGCTTG ACAAGCACTA CTGTCCTTTG GTCAGAGATG GGTCGAGAAC ATTGATGAAC
AGCAGCAAAG TCTCCAACAA CAACAGATAG CATAAATAGC ATACTAATAG ACACGTTAGA
AGACT
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| Protein sequence | MGKRKNNVKE QEKRKKAKQE KDSLLSTGLF QNNIGEEREN DSNVPNDWDN EEQDYELRPR
KLKNSGKVVE GLPIKTSEGK IERVVREIEP EEEPEPESEP EPEQEVPEED EQQKEEEDED
AHLTPTERLN KIKEEVADLA SKLIEDPEEN ISCLTRLRKM SESHNIVTSQ LAIMALIPVF
KSLAPSYMIR PLTDAEKREK VSREVARLRA YEQSLVSNYT YYIDNLGKMA RVSYSNSANN
SKITPDQLKK GALATKAACE LCLSSLRHFN YRNEVFSIVI RRLNKRPGNP EDLEIFTKSL
RVLETLLKED EENGDITHEV IKLMCKSIRD KKFRVDESVI NVFLSLSLLE DYDPNHNRDD
MPQKKLKKKD RVHLSKKERK ARKERKEIDE EMRRAEQAIT VEQREKYQAE VLKMLLMLYL
EILKAGSHTL ESGRNDATLL MASVLEGLAR FGQMANFDLL GDFLEVLREI MGDIIDEHNL
GNFDANIDDE TGGVYDGKQL RTVLLCIATS FSLMLNHGST GRLPMTIDLS KFVSSLYLIL
ADLSVDTDLE FSHKTLRLAD PLSMEQVAEK PAVNVSTKAE LLLRCLDFIF FRSKNGSVAR
AASFTKRLYL TALQTPEKTS LATLKFIGKL VSRYDESMKG LWNTEERISG EGSYVLGIER
DDREIELERS NSGAATLWEN VLLDKHYCPL VRDGSRTLMN SSKVSNNNR
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