| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68160 |
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| Symbol | NUC1 |
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| ID | 4839866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1269497 |
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| End bp | 1271265 |
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| Gene Length | 1769 bp |
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| Protein Length | 474 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391181 |
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| Product | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial precursor |
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| Protein accession | XP_001385597 |
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| Protein GI | 150866110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACAAATTCCC CGATTTTGCA GATACTTGTG CCGTTGTTGC AGTAGACTGA CCCGCCTGGC
CAATCCCACA GCTCTGGAGT TTTTTCTGAG AAAAAGAGCT AGTTCCACGA GATTTTCCAT
TCATCCATAC ATTTCAAGAT TGTAGTAGAA TACAATTTCT GATCACTTTT CAGTCAGTCA
CTAGATTTTA AGGGTCTTTC TTTTGTAAAA GAAGCTGCTT GATATCATTT TTGCATTTCC
ACATTTATCT TCGTATTCGT TGTAGTAATT CGTTGTCGTC ATAGTCTTTT GTTATTATCA
TGTTGAGAGC CTCCAGAATA GCCAGAAGCG TCAGGATTCC CAGCGTGAGC CAGAGATTGT
TTCTGAGTGT TTCGCGTGTC CAAGCTGCTC ATTCTGACGA ACCAAAACCA TTCCAAACCG
CATTGGGTAA GCCCGCTCAA AGATACTCTG ATGCTCCAGG GACTTTCGGA AAGACCACTT
TTTCCGAAGT CATGGATGAA GTCGATATGG TCTGGGGAAA AGACGATGAC CCTAAAAAGG
TTGCCAAACA GAACTCAAAA ATCAGACATT TCACCATTAA CTTCGGTCCT CAGCATCCTG
CTGCCCATGG AGTGTTGAGA TTGATCTTGG AATTGCATGG GGAAGAAATC GTCAGAGCCG
ATCCTCACGT AGGTCTTTTG CACAGAGGAA CCGAGAAGTT GATCGAGTCC AAAACATACA
TGCAAGCGTT GCCATACTTT GACAGATTGG ATTATGTGTC TATGATGACC AACGAATTGG
TCTTTGCATT GGCTGTAGAG AAGTTGTTGA ATGTAGAAAT TCCACTCAGA GCCAAATACA
TCAGAACTCT CTTCGGCGAA ATCACAAGAA TCTTAAATCA CTGTATGTCT GTCTTGTCGC
ACATCATGGA TGTCGGTGGT TTGACTCCGT TCCTTTGGGG TTTTGAAGAG AGAGAAAAGT
TGATGGAGTT CTACGAAAGA GTTTCTGGAG CCAGATTACA CACTGCCTAT GTGAGACCCG
GTGGTGTTTC CCAGGACTTA CCAGTCGGTT TATTGGACGA CATCTACATG TGGGCTACCC
AGTTTGGTGA CAGAATTGAT GAAACCGAAG AGTTGGTCAC CGATAACCGT ATCTGGAAGG
ATAGAACTGT AGATGTAGGT GTAGTTTCGG CTGAAGATGC GCTCAACTAC TCCCTTTCTG
GAGTCATGTT GAGAGGCTCT GGTATCCCAT TTGATATCAG AAAATCCCAG CCTTACGATG
CCTATGATTT GGTGGACTTC GACATTGCTG TCGGCATGAA TGGTGACTGT TACGACCGTT
ACTTGATTAG AATGGCTGAA TTCAGACAAT CATTGAGAAT TATCTTCCAA TGTATCAACG
ATATTCCAGA AGGTCCTGTT AAGGTCGAAG ACTACAAGAT CTCGCCTCCT CCAAGATCTG
TAATGAAGGA AGATATGGAA GCATTGATCC ATCACTTCTT GTTGTTCACT AAGGGTTACG
CTGTGCCTCA GGGTGAAACT TATACCGCCA TCGAAGCTCC TAAGGGTGAA ATGGCTGTGT
ATGTCGTCTC CGACGGCTCA GAAAGACCAT ACAGATGTAA GATCAGAGCC CCTGGTTTTG
CTCATTTGGG TGCTTTTGAC CACATCTCCA GAGGAAACTT GTTAGCCGAT GCTGTGGCCA
TCATTGGTAC CATGGACTTG GTGTTCGGAG AAGTTGATCG TTAGAACTGA AGTTTAAATA
TATATATTAG TAAAGAACTG CATTATTGT
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| Protein sequence | MLRASRIARS VRIPSVSQRL FSSVSRVQAA HSDEPKPFQT ALGKPAQRYS DAPGTFGKTT
FSEVMDEVDM VWGKDDDPKK VAKQNSKIRH FTINFGPQHP AAHGVLRLIL ELHGEEIVRA
DPHVGLLHRG TEKLIESKTY MQALPYFDRL DYVSMMTNEL VFALAVEKLL NVEIPLRAKY
IRTLFGEITR ILNHCMSVLS HIMDVGGLTP FLWGFEEREK LMEFYERVSG ARLHTAYVRP
GGVSQDLPVG LLDDIYMWAT QFGDRIDETE ELVTDNRIWK DRTVDVGVVS AEDALNYSLS
GVMLRGSGIP FDIRKSQPYD AYDLVDFDIA VGMNGDCYDR YLIRMAEFRQ SLRIIFQCIN
DIPEGPVKVE DYKISPPPRS VMKEDMEALI HHFLLFTKGY AVPQGETYTA IEAPKGEMAV
YVVSDGSERP YRCKIRAPGF AHLGAFDHIS RGNLLADAVA IIGTMDLVFG EVDR
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