| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68146 |
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| Symbol | SFL1 |
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| ID | 4839822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1176157 |
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| End bp | 1179570 |
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| Gene Length | 3414 bp |
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| Protein Length | 921 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391137 |
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| Product | putative transcription factor |
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| Protein accession | XP_001385578 |
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| Protein GI | 150866095 |
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| COG category | [K] Transcription |
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| COG ID | [COG5169] Heat shock transcription factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.800099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGTGGATTGT TTCGTTTCTT CTTGTTTATT CGCTACAGTT TCAAGATTTT CCCATTTTAC
CACTGGTTTG TTCTGCCGTA CTTGCTTGTA CCTGATACTC AACGTTGCAC AATACAGCCT
GAAAACCCCT GTACGATTTT TGAGGAAACA CTTGCCCGGT TTTTTATCTG AAATTTCACC
AGAATAAGCA CAGCTGAAGT CATCGGTCAG CCCTATAAAA CACTGTGGCA ACATAAAGAA
AGACCCTGTC GACCGTTCCT CTTCGCCGTC TCCGTCTTTT CAACCTGGTA GACCATATTT
GTGTGATCAT CTGGCTCTCC GAGTTTTTTC TGGCTCGATA ATTTTAAGTG TTGTTCTAGA
ATCAATTCAA TCCAGTAATT TTTCAGAACA TTAAACACAC TTCGCCAAAG TTACGACAAA
TCTACAACTT TCCGTACTAT CCACCACTAG CCATTTTGTA ATTCTAGCCA TTTCGCTAAC
TCATTTCACT GTTGTAACTC ATCTCAGCAC TGTACTATAC TTGTCATCAC TGTTTTATTA
CCTGCCTATC GTATCATGTA CATATAACCA TGTCCGCCGT AATTCCCTCG ACCAAGATTA
AGTTATCACC CGAAGCATTG GAAGCCTCTC ACGAACTGGC TCCGGCAAAT CCTACACTGG
GACAGACGAA TGTTGCGAAT AATTCTGCTG TAAACTCTAC AGCAAATTTA ACGACTGCAA
CGGGATCAAA TGCTGGATCA AATTCTGGGT CCAATTCGGG CTCCAATTCG GGCTCCAATT
CAGGCTCCGT TTCTGGTCCG GCCTCTTCAG CTAACTCTTC TGGAAAGACC CAGACTGTTT
TTATCCATAA ATTGTACGAC ATGCTTCACG ATGAGACGAT TTCACATCTT ATCTGGTGGT
CGCCTTCCAA CGACTCGTTC TGTCTTTTGC CAGGGGAAGA GTTCTCAAAG GTGTTGGCTC
AGTACTTCAA ACACACCAAC ATCGCCAGTT TCATCAGACA GTTGAACATG TACGGCTTCC
ATAAAGTCAA CGATACCTTC CAGAACAATG AAGATGGCTC AGGCTCTAAC GCAAACGCTA
ACTCTGTAAA CTCTTCTGGT ACTTCAACCA ACTCAACCAA CAACAGTAAC CCCAATAAAT
GGGAGTTCCG CCACCTGACC AACCAGTTCC GTAAAGGTGA TATCGAACTG CTAAAGCTTA
TAAAACGTAG ATCTTCTAAA AACATCAACT CGCACAAGGA AATCGTCAAT TTGAAGTCAT
TGCCTCCTAC TTCGAATCCG ATTATGGATC CGAATTCTGG ATATGGTCCA GCTCATGGCC
ATTACTATGG CTATAGTGAC GATGAAACTT CATCCATTGC CAGTGCGAGA AGTCCTCATG
GCTCTTCAGA CAATTTGCAC CAACAATATC ACCAATCGCT CAGAATACAC CAGCAGTCGC
TTTTGATCAA TAACGAAGGT AGAACTACTC CTAACGGCCA GATACAGCAT CCTCCACAAC
AGCAGCAACA AATTCAACAA CCCCAAGCTC AACAATTACA CGGCCTTGGA CTTTCAGCTC
CACAGTCACC AGCACATACT CCAATACACC AACCGTTATC TCCACGATTG CAGCCACCTC
CTCTTGTAAC CAATCCGTCG TTTGAAAACT CCATCAACTT CAAGTTCATA GAGTTGAACA
ACCAGTTGAG TTCGCTCAAA AACGAACTCA ACGTAATGCA CCAGAAGTAT GATCTGGCCC
ATTCGGAATT GGTCAGAAAT CAGTCAGACA CATTGCAGCT TGTAGAAATG CTAGAGAGAT
TTGTCCAGGC AACAGAAGCA GCACCAGAGA AACCTACAAT CAATTCCAAC ATCTTCAACA
ACTCGAATTC AAATGCTATT CCTACTGTAA CGGTAAACTC AAACGTTGCC AGAAAGGATG
TGCCTGATAG AGTGTCTAAT AACAAAACGC CCATCAATAA CACGGGTCGT CTAGCTGATG
AGGAGGGTAA TACTTCTCCT ATGTCTGGTG CCTTGTTCAA ATCCACGTCT TCTAGTTCTA
ATTCTGCCAC TTCTGCTTCT GTAACTTCTA CTTCAGCTAC TTCAGTTTCC GGTACTGGTT
CTTCTACAAC GTCTGCTGCC AGAACTCTTC TGGGAGAAAT CGGCTCATTA AAGTCCATAC
TTCTTCAGAG ACTAAGAGCT TCCACACAAC ACCAACAGCC TCCTCTTCGA GTACAGCAGG
CGAGTACATC TTCTTCTTAC CACTTAAGCA ATGCTCCCCA CACCACCAAC AACTCGCGTA
ATCCTTCAAA CTCTAATATA CAGATAGTGC CTCAACACTA TCCGTTGAAT CCACACTATA
CCATCTACCC ACAGAGTGAG TATAGGGGCC CAGACTTGAA TCAGAACCAG TCCCAGAATC
AAAATCAGCA TTCCAAACTG ATAACAGAAG AGTCTGCCTC TGCCAATCGC CATTTGTCCA
TCTTGATGGA CCCCTTGCAA CCGATGCCTA CTCGTAATCC TATTCTAGAT GAGCAATCTA
CCAACTTTAG ATTGAGAGCC GAGTCGAAAA GCTACTCTCC TCTTACTGTT GGAGGTGCCA
GTGGCCAGTT ACCTACCAGT TCTGGGAATG CTAATCAAGC CCAGCAAGCA CATGTCACAC
AACTACAGCC CCCAGCGCAT CTTCATTCAC AGCCACCTAC TGCAAATGGA CCTGGAGGAT
CACAGCAGAA TTCACAGTCT TCGTCTAGAT CGTCTATCGT GGAGAAGAAG ACAAGCTCTC
GTTCTTCCAG CTTGATCAAC ACTCCTGCTG GTCATGATAG TAGCAAGCCT TCGTATCAGC
AGTATCCATT TCCACATGTA AATAGTCATT CGACTCATTT GCATTCATAC CATAACGGCT
CGACCAGAAC TAATTCTCTT CCAAACCCGC CCATCGACCA TAGCGTGACT ACACCTTTAA
CTCCGCCAGA ACCTCCTTCT ACCAACCCTT CCTACTTCAA CCAAAGAAAC TCCTTCACTT
CCATGTACGA TTCCCATCAA CAGCAGGGTC ACAATTACAG AGTGCCTCCT TATTCTCAAC
AGCCTACGTC CATGCCTAAA CCTACAGGCC CTATCACTTC TTCACCAATA TCTACTACTT
CTCCTCTGAG ACTTCAGGAG TCCTCAGAAT TTGCGACCTC CATGTCTAAG AACCAGTTGC
CAAGTGTAAG TGAACTAGAC AAGTCGATTA AGGGTGCCTC TTCCAATGTT CCGAAGTCGG
CTACTACCTT ACCGCCATTG CATCTGAGCC CTATGTTTGC GTTGTTGAAC AAGGACAATG
ACGATGACAA AATACTCAAG AAGCGTAAAA CCTGATTGGG TAACAAATGT TTCCTGTCCC
ATTAATGATA GTTTATAGAA TCTGTATGAA TACCAATGTA TTTTTATTCT GCAA
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| Protein sequence | MSAVIPSTKI KLSPEALEAS HESAPANPTS GQTNVANNSA VNSTANLTTA TGSNAGSNSG
SNSGSNSGSN SGSVSGPASS ANSSGKTQTV FIHKLYDMLH DETISHLIWW SPSNDSFCLL
PGEEFSKVLA QYFKHTNIAS FIRQLNMYGF HKVNDTFQNN EDGSGSNANA NSVNSSGTST
NSTNNSNPNK WEFRHSTNQF RKGDIESLKL IKRRSSKNIN SHKEIVNLKS LPPTSNPIMD
PNSGYGPAHG HYYGYSDDET SSIASARSPH GSSDNLHQQY HQSLRIHQQS LLINNEGRTT
PNGQIQHPPQ QQQQIQQPQA QQLHGLGLSA PQSPAHTPIH QPLSPRLQPP PLVTNPSFEN
SINFKFIELN NQLSSLKNEL NVMHQKYDSA HSELVRNQSD TLQLVEMLER FVQATEAAPE
KPTINSNIFN NSNSNAIPTV TVNSNVARKD VPDRVSNNKT PINNTGRLAD EEGNTSPMSG
ALFKSTSSSS NSATSASVTS TSATSVSGTG SSTTSAARTL SGEIGSLKSI LLQRLRASTQ
HQQPPLRVQQ ASTSSSYHLS NAPHTTNNSR NPSNSNIQIV PQHYPLNPHY TIYPQSEYRG
PDLNQNQSQN QNQHSKSITE ESASANRHLS ILMDPLQPMP TRNPILDEQS TNFRLRAESK
SYSPLTVGGA SGQLPTSSGN ANQAQQAHVT QLQPPAHLHS QPPTANGPGG SQQNSQSSSR
SSIVEKKTSS RSSSLINTPA GHDSSKPSYQ QYPFPHVNSH STHLHSYHNG STRTNSLPNP
PIDHSVTTPL TPPEPPSTNP SYFNQRNSFT SMYDSHQQQG HNYRVPPYSQ QPTSMPKPTG
PITSSPISTT SPSRLQESSE FATSMSKNQL PSVSELDKSI KGASSNVPKS ATTLPPLHSS
PMFALLNKDN DDDKILKKRK T
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