Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_68074 |
Symbol | FST10 |
ID | 4840364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 693878 |
End bp | 696313 |
Gene Length | 2436 bp |
Protein Length | 674 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391679 |
Product | putative zinc-finger protein |
Protein accession | XP_001385835 |
Protein GI | 150866289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0491121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCTGGCAGT AGCAAGAATC CACTTCCAGC CGTGCCTCGT GTATTTATAT AACGGTATCT GTGTCGCAGC TATTTCGCCA GCATTTATCA GTGTATATCA CGGTTGAATA ACGTTTACCA CCACAACGGG TATGACCTAG GCAGTTAGAC ATCTGTAGTC GACACTTTTT TTAGCTTCTC ACTTAACCAA TGGCGGGAAA CGTCGAAAAG CCCAAGCCGC TAAAGGTGTT TGGCAGAACC CACTACGCTT GTACCAGATG TAAGCTCTCC AAGATCAAGT GTTCCGGAGA AAAGCCAGCA TGCTCCAATT GCAAGAGTGT AAACAAGGAA TTCGCCTGCG TGTATCCTGC CAAAGATCGT AAGATAGTTA TCATGGAAAG CGACCTCAAC AAGTTGCACG ACCGAGTGGA ACATTTAGAA ACGCTTCTTC GGCAACTGGG CCAATCGGAT CCAACAGATC TGCTGAGCCA GCTGGAGCTT CAACAGCAGA CTAATCCTAG TCATCAGTAC TTATATTCTG AACAATCACC GTCCTCGCTT TCTGTCGTAG AAAAGCCAGA GTCTTACGGT AGCATCTTGT TTGAAGATGT CTTTGCCCCG GAATTTGAGG ATACCCTGCT TCTGTCCAAT ATGCTCCGCG TCTGTGAGCA GCAACTTCCA GATCGTAAAT ACGCCATGCA GCTTCTAGAG AAAGTGTATG CGACATACTC GTCAGAGTTC TATCTCATTG ACATTGCAGA AATGCATGAC CTCTTTGATG ACGTGTATTC GCTTTTCAGG CGCTCAGCAG CAAATAATGG CCAGTACGAT TTCGAATCTA TAGCCAACAG CAAAAGCGGA ATGAACCAGA CCTCGTTCTC GTATCTCTTC GCCGTCCTTG CCTTCGGTGA GCAGTTGCTC AACGTCCAGA CGCCTGAAGG GAAGTACCCA GGTATAAAAC ACTATCTTTT GGCAGAAAGG CTCTTCCGAT TGACCAAAGA GCAGATTGAT TTCACCTTCA TTCAATGTGC CCTTTTGCTT GGTTTATACG CTGCCAACTT GAGCAGATAC AACACTGTGT ATAACTACTT GGGTGTAGCA GCCCGTTCTG CCGTAGCTCA GGGGTATCAT CGCCAGAAGG AAATTCCCAA GAGCATCCAG TCAGACCAGG AAATCTTTGC TTTTCGTAGG CATGCCGAAA AGGCAAAACT TCTTTGGTGG TCGGTCTTCG TCATCGACAC AACCTGGGCA ACAAAAACTG TCCATTTCCA ATACACCGAC ACAGACGTAG ATTTACCCTG CGAAAACACT TTTCCCTTGC TGGAAGAGTT TGACCCCAAC ATTCTCGAGG TGAATGTTCA CCTCACGAAA TACATAGCCA AGTTTGTCCG GTTGATCTAC GGTCCAAATA TCAGAACTTT TTCCATCAAC TACATCAACA CCAACCAATT CAACCAGAAG CTACTACTCA AAAATATTAT CAAGTCTTCC CGCGATTTAG TGAATGATTT CGAGACACCA TTACTTGGCC AGTTCAAAGA CTCGAACATC ATCGAACGTG GTCGTAGAAA CTTGGCCAAT TTGTTTCTCA GGTATCATCA GCTTATCATC TTGATCACTA AGCCACTGTT GTCGCTCGTT TTCGATGCTT CAGCTCCCTC CGTCGTTGAA AATTATGAAG ACCTCTTCTC GACAATCTCA AAAGGGTTAT TCACCTCTTG TGCAACTATT GATCTAATTG CCAATTTGTT TGTCAAGCAT AAGATCTTTG TTTTGGGTTT CTGGGATAGC CAGCACTTGT TTGCGGCAAT TTTGTACATC ATCATTGCCT GCTTGGATGG AAAGTACTAT CCGCAGTTGA ATATTGGTAT CGCATTATTG AGGTTCATGG CCCAACGCAC CAATATCAAT GCCAAAAAGT GCTTTGACAA GCTTGTGGAA ATCAACAAGT TACTCATGGA TGCTCCTGAA GTCAAGCTCA GATTAAACTT GTATGCGAGC GTGGCAGATT TCATCACAGA TGACAAAGAT GCTCCATATA ACCCTCTTCC GCAATCGAGC TTGAATACAA CGTCTTCCAC AGGAGATTTC AAGTTCACTC CAGTACTTCC CCTCCCATAT TTGCCAGAAC CCTACCGTAT AATAACGTAC GGTACCAACA AAAAGAGGTA TAGTGAGAGT TCGCGCAGTG CTATATTCAC CTTGATTAAC GAGATTCAGG GTTGGGACGA TTAGATTACG TGCGAGTGAA CTGTTGCCAT TCTTTGATCT TATTTTACAT GTATTATATA AGTATCACAT AGCTATGTCC GGACACGGTA GTCGGACTGA ACGCAGCGAT TGCACTTGCT CATTATCCTC GTTGATGTTC ACTCTACCTC ATTATTTATT AGCTTCACTT CGTTTCCTTG ACAATTTTAG CTTAATAGAG TATATAGAAA AGTATGGCTT CGGATC
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Protein sequence | MAGNVEKPKP LKVFGRTHYA CTRCKLSKIK CSGEKPACSN CKSVNKEFAC VYPAKDRKIV IMESDLNKLH DRVEHLETLL RQSGQSDPTD SSSQSELQQQ TNPSHQYLYS EQSPSSLSVV EKPESYGSIL FEDVFAPEFE DTSLSSNMLR VCEQQLPDRK YAMQLLEKVY ATYSSEFYLI DIAEMHDLFD DVYSLFRRSA ANNGQYDFES IANSKSGMNQ TSFSYLFAVL AFGEQLLNVQ TPEGKYPGIK HYLLAERLFR LTKEQIDFTF IQCALLLGLY AANLSRYNTV YNYLGVAARS AVAQGYHRQK EIPKSIQSDQ EIFAFRRHAE KAKLLWWSVF VIDTTWATKT VHFQYTDTDV DLPCENTFPL SEEFDPNILE VNVHLTKYIA KFVRLIYGPN IRTFSINYIN TNQFNQKLLL KNIIKSSRDL VNDFETPLLG QFKDSNIIER GRRNLANLFL RYHQLIILIT KPSLSLVFDA SAPSVVENYE DLFSTISKGL FTSCATIDLI ANLFVKHKIF VLGFWDSQHL FAAILYIIIA CLDGKYYPQL NIGIALLRFM AQRTNINAKK CFDKLVEINK LLMDAPEVKL RLNLYASVAD FITDDKDAPY NPLPQSSLNT TSSTGDFKFT PVLPLPYLPE PYRIITYGTN KKRYSESSRS AIFTLINEIQ GWDD
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