Gene PICST_68074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_68074 
SymbolFST10 
ID4840364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp693878 
End bp696313 
Gene Length2436 bp 
Protein Length674 aa 
Translation table12 
GC content44% 
IMG OID640391679 
Productputative zinc-finger protein 
Protein accessionXP_001385835 
Protein GI150866289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0491121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCTGGCAGT AGCAAGAATC CACTTCCAGC CGTGCCTCGT GTATTTATAT AACGGTATCT 
GTGTCGCAGC TATTTCGCCA GCATTTATCA GTGTATATCA CGGTTGAATA ACGTTTACCA
CCACAACGGG TATGACCTAG GCAGTTAGAC ATCTGTAGTC GACACTTTTT TTAGCTTCTC
ACTTAACCAA TGGCGGGAAA CGTCGAAAAG CCCAAGCCGC TAAAGGTGTT TGGCAGAACC
CACTACGCTT GTACCAGATG TAAGCTCTCC AAGATCAAGT GTTCCGGAGA AAAGCCAGCA
TGCTCCAATT GCAAGAGTGT AAACAAGGAA TTCGCCTGCG TGTATCCTGC CAAAGATCGT
AAGATAGTTA TCATGGAAAG CGACCTCAAC AAGTTGCACG ACCGAGTGGA ACATTTAGAA
ACGCTTCTTC GGCAACTGGG CCAATCGGAT CCAACAGATC TGCTGAGCCA GCTGGAGCTT
CAACAGCAGA CTAATCCTAG TCATCAGTAC TTATATTCTG AACAATCACC GTCCTCGCTT
TCTGTCGTAG AAAAGCCAGA GTCTTACGGT AGCATCTTGT TTGAAGATGT CTTTGCCCCG
GAATTTGAGG ATACCCTGCT TCTGTCCAAT ATGCTCCGCG TCTGTGAGCA GCAACTTCCA
GATCGTAAAT ACGCCATGCA GCTTCTAGAG AAAGTGTATG CGACATACTC GTCAGAGTTC
TATCTCATTG ACATTGCAGA AATGCATGAC CTCTTTGATG ACGTGTATTC GCTTTTCAGG
CGCTCAGCAG CAAATAATGG CCAGTACGAT TTCGAATCTA TAGCCAACAG CAAAAGCGGA
ATGAACCAGA CCTCGTTCTC GTATCTCTTC GCCGTCCTTG CCTTCGGTGA GCAGTTGCTC
AACGTCCAGA CGCCTGAAGG GAAGTACCCA GGTATAAAAC ACTATCTTTT GGCAGAAAGG
CTCTTCCGAT TGACCAAAGA GCAGATTGAT TTCACCTTCA TTCAATGTGC CCTTTTGCTT
GGTTTATACG CTGCCAACTT GAGCAGATAC AACACTGTGT ATAACTACTT GGGTGTAGCA
GCCCGTTCTG CCGTAGCTCA GGGGTATCAT CGCCAGAAGG AAATTCCCAA GAGCATCCAG
TCAGACCAGG AAATCTTTGC TTTTCGTAGG CATGCCGAAA AGGCAAAACT TCTTTGGTGG
TCGGTCTTCG TCATCGACAC AACCTGGGCA ACAAAAACTG TCCATTTCCA ATACACCGAC
ACAGACGTAG ATTTACCCTG CGAAAACACT TTTCCCTTGC TGGAAGAGTT TGACCCCAAC
ATTCTCGAGG TGAATGTTCA CCTCACGAAA TACATAGCCA AGTTTGTCCG GTTGATCTAC
GGTCCAAATA TCAGAACTTT TTCCATCAAC TACATCAACA CCAACCAATT CAACCAGAAG
CTACTACTCA AAAATATTAT CAAGTCTTCC CGCGATTTAG TGAATGATTT CGAGACACCA
TTACTTGGCC AGTTCAAAGA CTCGAACATC ATCGAACGTG GTCGTAGAAA CTTGGCCAAT
TTGTTTCTCA GGTATCATCA GCTTATCATC TTGATCACTA AGCCACTGTT GTCGCTCGTT
TTCGATGCTT CAGCTCCCTC CGTCGTTGAA AATTATGAAG ACCTCTTCTC GACAATCTCA
AAAGGGTTAT TCACCTCTTG TGCAACTATT GATCTAATTG CCAATTTGTT TGTCAAGCAT
AAGATCTTTG TTTTGGGTTT CTGGGATAGC CAGCACTTGT TTGCGGCAAT TTTGTACATC
ATCATTGCCT GCTTGGATGG AAAGTACTAT CCGCAGTTGA ATATTGGTAT CGCATTATTG
AGGTTCATGG CCCAACGCAC CAATATCAAT GCCAAAAAGT GCTTTGACAA GCTTGTGGAA
ATCAACAAGT TACTCATGGA TGCTCCTGAA GTCAAGCTCA GATTAAACTT GTATGCGAGC
GTGGCAGATT TCATCACAGA TGACAAAGAT GCTCCATATA ACCCTCTTCC GCAATCGAGC
TTGAATACAA CGTCTTCCAC AGGAGATTTC AAGTTCACTC CAGTACTTCC CCTCCCATAT
TTGCCAGAAC CCTACCGTAT AATAACGTAC GGTACCAACA AAAAGAGGTA TAGTGAGAGT
TCGCGCAGTG CTATATTCAC CTTGATTAAC GAGATTCAGG GTTGGGACGA TTAGATTACG
TGCGAGTGAA CTGTTGCCAT TCTTTGATCT TATTTTACAT GTATTATATA AGTATCACAT
AGCTATGTCC GGACACGGTA GTCGGACTGA ACGCAGCGAT TGCACTTGCT CATTATCCTC
GTTGATGTTC ACTCTACCTC ATTATTTATT AGCTTCACTT CGTTTCCTTG ACAATTTTAG
CTTAATAGAG TATATAGAAA AGTATGGCTT CGGATC
 
Protein sequence
MAGNVEKPKP LKVFGRTHYA CTRCKLSKIK CSGEKPACSN CKSVNKEFAC VYPAKDRKIV 
IMESDLNKLH DRVEHLETLL RQSGQSDPTD SSSQSELQQQ TNPSHQYLYS EQSPSSLSVV
EKPESYGSIL FEDVFAPEFE DTSLSSNMLR VCEQQLPDRK YAMQLLEKVY ATYSSEFYLI
DIAEMHDLFD DVYSLFRRSA ANNGQYDFES IANSKSGMNQ TSFSYLFAVL AFGEQLLNVQ
TPEGKYPGIK HYLLAERLFR LTKEQIDFTF IQCALLLGLY AANLSRYNTV YNYLGVAARS
AVAQGYHRQK EIPKSIQSDQ EIFAFRRHAE KAKLLWWSVF VIDTTWATKT VHFQYTDTDV
DLPCENTFPL SEEFDPNILE VNVHLTKYIA KFVRLIYGPN IRTFSINYIN TNQFNQKLLL
KNIIKSSRDL VNDFETPLLG QFKDSNIIER GRRNLANLFL RYHQLIILIT KPSLSLVFDA
SAPSVVENYE DLFSTISKGL FTSCATIDLI ANLFVKHKIF VLGFWDSQHL FAAILYIIIA
CLDGKYYPQL NIGIALLRFM AQRTNINAKK CFDKLVEINK LLMDAPEVKL RLNLYASVAD
FITDDKDAPY NPLPQSSLNT TSSTGDFKFT PVLPLPYLPE PYRIITYGTN KKRYSESSRS
AIFTLINEIQ GWDD