Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_68020 |
Symbol | LYS2 |
ID | 4840080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 353493 |
End bp | 357715 |
Gene Length | 4223 bp |
Protein Length | 1394 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391395 |
Product | L-aminoadipate-semialdehyde dehydrogenase, large subunit |
Protein accession | XP_001385417 |
Protein GI | 126137788 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain [TIGR01746] thioester reductase domain [TIGR03443] L-aminoadipate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.224506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0608631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCT GGTCAGAGTA TTTGGATAGT CCAACTTTGT CTGTGTTACC ACATGACTTC TTGAAGCCTG CCAATAACCA GTCGGTCGAG GCTACCTATA GTTTTGAAAT TGAAAAGGAA GAGAGCTTTA TTACTGGACT TGCTGTCTTT TCTGCATTAA TCTACAGATT GACTGGAGAC GAGGACATAG TCATTGCTAC AGATGCGAAG ACTTCAGGAA CTGAGTTCAT CATCAGATTG AGTTTGACAC CAGAGTTGAG TTTTGATCAA TTAGTTGCTA ATGTCACCAA GGAATTCGAA AATAATGTTG CCAAGATTGA CTACACTTCT CTTTCGGAGG TATCAGAACA GATAAGAGCT GCTAAGAAAT TGGAAGAACA TCCAGGCTTG TTCAGGTTAT CATATCAGCA CTCGAATCCT AACCAACAGC TATCCACCAC TGTTGAGGGC TCCATTCGTG ATTTGGCTGT ATTCACAGAA GGCAACAAGT TCACCATTTT CTACAACAGT TTGCTCTATA AGCATGACAG AGTTGTTGTA TTTGGAGAAC AGTTTTCGCA ATACATTGCT AAAGCTTCCT CCAATTCAAA TGTTCAGATT ACAAAGGTTA ACTTGATCAC TCCATCTCAG AAGGAACATT TGCCAGATCC AACTTTGGAC TTGGACTGGG GCGGATACCG TGGAGCCATC CAAGACATCT TCATGAAGAA TGCCTTAGCA CATCCAGAAA AACCATGTGT GATTGAAACC AAGTCGTTCT TGGATCCTTC TACAAAGACT CGAACCTTCA ACTACAAACA AATCAATCAG GCTTCCAACG TAGTAGGTAA CTATTTGAAG GAAACTGGTA TCAAGAAAGG AGATATAGTC ATGATCTACG CTTACAGAGG TGTTGATTTG ATGGTAGCTG TGATGGGTGT CTTGAAGGCT GGTGCCACCT TTTCTGTGAT TGACCCTGCC TACCCTCCAG CTAGACAAAA TATCTACCTC TCTGTAGCCA AGCCTTCTGG GTTAATTGGG TTGGAAAAGG CTGGGACCTT AGACTCATTA GTTGTGGATT ACATCAAAAA CGAGTTGAAG GTAGTTACCA CAATTCCTCA ATTGAAAATC AACGATGACG GTTCATTGGT CGGAGGTGTG ATTGAAGGCC AATCCGCTGA TTGTTTACAA GGCTACGAAA AGTTCCAAGA TCAGGCTACA GGAGTCATTG TTGGTCCTGA TTCCAATCCT ACTCTTTCAT TCACTTCTGG TTCTGAAGGT ATTCCCAAGG GTGTTTTGGG TCGTCATTAC TCTTTGGCTT ACTATTTCCC ATGGATGGCA AAGACTTTTG GATTGTCTGA AAAGGACAAG TTTACCATGT TGTCTGGTAT TGCTCATGAT CCAATCCAAA GAGATATGTT CACGCCTTTA TTTTTGGGGG CTCAATTGTT GGTGCCCACT GCAGACGATA TTGGAACTCC AGGTAAATTG GCAGATTGGA TGGCTGAATA TGGTGCTACT GTAACTCATT TGACACCAGC TATGGGTCAA TTGTTGAGCG CTCAAGCTTC TACACCAATT CCAAGTTTGC ATCATGCCTT CTTTGTTGGT GATATTTTGA CGAAGAGAGA CTGTTTGAGA TTGCAAACTT TGGCAGAAAA CGTTTTTATT GTAAATATGT ACGGTACTAC TGAAACTCAA AGGTCGGTGT CCTTCTTCGA GATTAAGAGC AGAAAGGCTG ATTCAACTTA CTTGAAGAAC TTAAAGGATG TCATGCCAGC AGGTACCGGT ATGTACAATG TCCAGTTGCT AGTTGTCAAC AGAAATGACA GATCGCAAAC TTGTGGTGTT GGTGAAGTAG GAGAAATCTA CGTTAGAGCA GCTGGACTTG CCGAAGGGTA CAGAGGGTTG CCAGACTTGA ACAAAGAAAA GTTTGTTACT AACTGGTATG TTGATTCTAG CGAATGGGTT AAGAAAGACG AGGAAAACAA GAAGCCAGAA GAAGTATGGA GAGAACACGG ATGGTTGGGT CCAAGAGACA GATTGTACAG AACTGGAGAT TTAGGACGTT ATCTTCCAGA TGGTAATGTT GAATGTTGTG GTCGTGCTGA CGATCAAGTC AAGATCAGAG GGTTCAGAAT TGAATTGGGA GAAATCGACA CCCACTTGTC ACAACATCCC TTGGTCAGGG AGAACGTTAC TTTGGTTAGA AGAGACAAAA ACGAAGAACC AACATTGATT TCATATATAG TTCCCAAAGA GTCTCCCGAA TTGGCTCAAT TTAAGGCTGA AGTGGACGAT GAAACCGACT CTGATCCTAT TGTTCAAGGT TTAGTTTCCT ACAGAGAATT GATAAAGGAC ATCAAGAACT ACTTGAAGAA GAGATTGGCA TCTTATGCTG TGCCAACTGT AGTGGTTCCT CTTGCTAAAT TGCCTTTGAA CCCTAACGGT AAGGTGGACA AGCCAAAATT GCCATTCCCA GATACGGCAC AATTGTCAGC TGTGGCCAAA TTGGTTGCCA GCAGTAGAGC TGGTGGAGCT GAAGCCGCCG AAGAAGAAGA ATTCTCTAAG TTAGAAGAAG TTATCAGAGA TTTGTGGTTA GAGGTTTTGC CCACCAGACC AGCAACGATT TCCAAGGACG ACTCGTTCTT TGACTTGGGT GGTCACTCCA TCTTGGGTAC TAGAATGATT TTTGAATTGA GAAAGAGATT GAATGTCGAT GTTCCATTGG GTGTTATCTT TAAGAACCCT TCTATTGAAG CTTTTGCCAA GGAAGTGGAA AAGTTTATTA AGGGTTCCGA CTTTCAACTA GCTGATGGCA AGGAAACTGA AGAAGAAGCC GAAGAAATTA TCGACTATTC CAAAGACGCT GCTGAGTTGG CTCAAAGTGC ATTGCTTGAA AAATACGACT CGTTGAAGGA GCTTGATACA TCGAAGACAA TCAACGTGTT CGTCACTGGT GGTACTGGTT TCTTGGGCTC TTTCATCATA CGCGATATCT TGACGTCTCG TCCAAACCAA TCTTTTAAGA TCTACGCTCA TGTCAGAGCT TCTTCCAAAG AAGCAGGTCT CGAAAGGTTA CGCAAGGCTG GTCTTACTTA CGGTATTTGG CAAGACGAAT GGTCAAAGAA TATCGAGGTG GTATTGGGTG ATTTGTCCAA GCCGCAGTTT GGTTTGGACG ATACTGATTG GGTACAATTA GCAAACGAAA TCGATGTCAT AGTTCATAAC GGTGCTTTTG TTCACTGGGT GTATCCATAC TCTCAATTGA GAGATGCCAA TGTCAATGGC ACCATTAACG TTTTGAACTT GTGTGGTCAA GGTAAGGCTA AGTTCTTTTC GTTCGTTTCT TCTACATCTG CTCTTGACAC AGACTACTTT GTCCACCTTT CCGACGAATT GATTGCTAAG GGCTTGCCTG GTCTTCCAGA ATCCGATAAT TTACAAGGTT CCGCCAAGGG CTTGGGCAAT GGTTATGGTC AATCCAAATG GGCTGCCGAA TATATTATCA GAGCTGCTGG TAAGAGAGGA TTGAGAGGTT GTATCACGAG ACCAGGTTAC GTAACTGGCT TTTCGCAGAC TGGTGCTTCC AACACTGATG ATTTCTTGTT GAGAATGTTA AAGGGAAGTG CTGAATTGGG ATTCTACCCC AACATTTCAA ACAATGTCAA CATGGTTCCA GTAGACCATG TTGCCAGAGT AGTCGTAGCA ACAGCATTGC ATCCTCCTGT AGACACTGAA TTGGCTGTAG CTCATGTCAC TGGACATCCA AGAATCGAAT TTAATGATTT CTTGGGTACT TTGAAGACCT ATGGATACAA TGTCGATATC GTCGACTACC CTGAATGGAG AAAGGAGCTA GAAAGATTTG TAGTGGAAGA CTCGAAGGAA TCTGCTTTGT TCCCATTGTT GCACTTTGTT TTGGACAACT TGCCACAGGA TACCAAGGCT CCAGAATTGG ACGATTCCAA CGCTGCCACT TCTTTGAAAG CTGATGCTGC CTGGACTGGA GTCGATTTCA GTTCTGGAAG GGGTGTGGAC GCTAAGCAGA TGAGCATCTA CATCAGTTAC TTGATCAAGA CTGGCTTCTT GCCTGTACCT ACTGGTGAAG GTGCAAAGTT GCCTCAAATT GAAATTAGCA AAGTGACCTT GGACTTGATT AATTCTGGAG CCAGCGCCCG TTCTTCGGCT GCTGCACCTA AGTAAGTATA AGTAATTTCA CAAATCGAAA ATGCATAGCT ATT
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Protein sequence | MSFWSEYLDS PTLSVLPHDF LKPANNQSVE ATYSFEIEKE ESFITGLAVF SALIYRLTGD EDIVIATDAK TSGTEFIIRL SLTPELSFDQ LVANVTKEFE NNVAKIDYTS LSEVSEQIRA AKKLEEHPGL FRLSYQHSNP NQQLSTTVEG SIRDLAVFTE GNKFTIFYNS LLYKHDRVVV FGEQFSQYIA KASSNSNVQI TKVNLITPSQ KEHLPDPTLD LDWGGYRGAI QDIFMKNALA HPEKPCVIET KSFLDPSTKT RTFNYKQINQ ASNVVGNYLK ETGIKKGDIV MIYAYRGVDL MVAVMGVLKA GATFSVIDPA YPPARQNIYL SVAKPSGLIG LEKAGTLDSL VVDYIKNELK VVTTIPQLKI NDDGSLVGGV IEGQSADCLQ GYEKFQDQAT GVIVGPDSNP TLSFTSGSEG IPKGVLGRHY SLAYYFPWMA KTFGLSEKDK FTMLSGIAHD PIQRDMFTPL FLGAQLLVPT ADDIGTPGKL ADWMAEYGAT VTHLTPAMGQ LLSAQASTPI PSLHHAFFVG DILTKRDCLR LQTLAENVFI VNMYGTTETQ RSVSFFEIKS RKADSTYLKN LKDVMPAGTG MYNVQLLVVN RNDRSQTCGV GEVGEIYVRA AGLAEGYRGL PDLNKEKFVT NWYVDSSEWV KKDEENKKPE EVWREHGWLG PRDRLYRTGD LGRYLPDGNV ECCGRADDQV KIRGFRIELG EIDTHLSQHP LVRENVTLVR RDKNEEPTLI SYIVPKESPE LAQFKAEVDD ETDSDPIVQG LVSYRELIKD IKNYLKKRLA SYAVPTVVVP LAKLPLNPNG KVDKPKLPFP DTAQLSAVAK LVASSRAGGA EAAEEEEFSK LEEVIRDLWL EVLPTRPATI SKDDSFFDLG GHSILGTRMI FELRKRLNVD VPLGVIFKNP SIEAFAKEVE KFIKGSDFQL ADGKETEEEA EEIIDYSKDA AELAQSALLE KYDSLKELDT SKTINVFVTG GTGFLGSFII RDILTSRPNQ SFKIYAHVRA SSKEAGLERL RKAGLTYGIW QDEWSKNIEV VLGDLSKPQF GLDDTDWVQL ANEIDVIVHN GAFVHWVYPY SQLRDANVNG TINVLNLCGQ GKAKFFSFVS STSALDTDYF VHLSDELIAK GLPGLPESDN LQGSAKGLGN GYGQSKWAAE YIIRAAGKRG LRGCITRPGY VTGFSQTGAS NTDDFLLRML KGSAELGFYP NISNNVNMVP VDHVARVVVA TALHPPVDTE LAVAHVTGHP RIEFNDFLGT LKTYGYNVDI VDYPEWRKEL ERFVVEDSKE SALFPLLHFV LDNLPQDTKA PELDDSNAAT SLKADAAWTG VDFSSGRGVD AKQMSIYISY LIKTGFLPVP TGEGAKLPQI EISKVTLDLI NSGASARSSA AAPK
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