| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68010 |
|---|
| Symbol | |
|---|
| ID | 4839900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 289730 |
|---|
| End bp | 290595 |
|---|
| Gene Length | 866 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640391215 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385396 |
|---|
| Protein GI | 150865966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.77073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GGATGGGCTG TGATAGACGT TTGCTTAATA TCATTTCTGA TATCACCGAT TTGTCCTTCG
AAAGATTCTC AAAGGGAATT AGTGAAACCA ACTATCAGAT TCTCTGTAAT GAAATGAGAC
GTAAATTGGA CCTGATGAGT CTAAACTTGA TGGAAACTAT GTTAATTCCA GAACTGTTGA
GTACACCGAG CGCATCTTCC GAACCCAGCA CTCCAGCTGA AGCTGAATTG TGTCTAATCA
ACTCTGAGAT GGAGGTGGAA GAATTCTGTT TCTTACTTTC TTGTGAGGTA AAGAGATTAT
CCACCGTCGT TTACTTGGAA TGTTGTTTAT TAAACAAGAC GCCAGAAGAT GAAATGATTC
AGCAATTGGT GAAACAGATA TTCTCTCTTT TGGAATTCAT AGTTATCAAG AACGACTTCA
AGTGGTACTC CACCTTGCTT TGGTCTGTTT TCATGGCCAG TTCGGAAATT CTGAGCTTGA
GTAAAGATTG TGAAGAATTG AGGTATTTGG CTTTACAAAT TTTGGACATT TTGGAAAAGA
CAACATTAGG TAATGTTGGA AGGACCAGAA AGATTCTCTT GGACATTTGG AAAAGAAGAG
ACTTAGAGCA GAGTGACGAC AATAGTTATG GATATGTTCG TAAAACTATT GACGACGGGA
ATCCTAAGAA TGACGGATTG TTCTTAGGCT TTACTAATGA TTGGGAAAAG TTTGTGGTCA
AGGAAGATTA TGCGATTTCC TTGGCTTAAT TTTCTTTTGT TGTTTTGCTT TCATCTTGTA
TTAAATTTAT GTTGGAAATG GTGTTTTGTT TTATAGTTCT TCTTGTTAGT TAGTAAAGGT
TAAGTTAAAT TCAATGATAC AATGGA
|
|---|
| Protein sequence | MGCDRRLLNI ISDITDLSFE RFSKGISETN YQILCNEMRR KLDSMSLNLM ETMLIPESLS
TPSASSEPST PAEAELCLIN SEMEVEEFCF LLSCEVKRLS TVVYLECCLL NKTPEDEMIQ
QLVKQIFSLL EFIVIKNDFK WYSTLLWSVF MASSEISSLS KDCEELRYLA LQILDILEKT
TLGNVGRTRK ILLDIWKRRD LEQSDDNSYG YVRKTIDDGN PKNDGLFLGF TNDWEKFVVK
EDYAISLA
|
|---|
| |