Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_66007 |
Symbol | CCT5 |
ID | 4840234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1541703 |
End bp | 1543423 |
Gene Length | 1721 bp |
Protein Length | 550 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391549 |
Product | T-complex protein 1, epsilon subunit |
Protein accession | XP_001385649 |
Protein GI | 150866152 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02343] T-complex protein 1, epsilon subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGTTTACCTC ACAAGCAACA TGGCTGCACC CGCTGGATTG CCGGACATGT CCAACGCCAT TATGGCGCAA GACGAAATGG GAAGACCTTT CATTATTGTC AGAGATCAAG GCAAAAAGCA GAGAAAGCAT GGGCTTGAAG CTACAAAATC GCATATTTTA GCTGCCAGAT CTGTAGCCTC CATTGTGAAA ACTTCGCTTG GGCCCCGTGG ATTGGACAAG ATCTTAATTT CGCAAGATGG AGATATCACC ATCACCAACG ATGGAGCCAC TATCTTGTCG CAAATGGATT TGGACAATGA GATTGCTAAG CTTCTTGTAG AATTGCTGAA GTCACAAGAT GACGAAATTG GTGATGGGAC CACTGGTGTT GTCGTTTTGG CTGGTGCTCT TTTGGACCAA GCGCTTGAGT TGATCGAGAA GGGTATCCAT CCCATAAAAG TGGCTAATGG CTTTGACGAA GCTTGTAAGA TTGCTGTTCA ACAGTTGGAC GATGTTGCAG ACGACATAAA CATCAGCACC GAATCGTCAG ACTCCAACCT TTTGAAAGCA GCCAAGACAT CCTTAGGCTC CAAAATCGTT TCTAAGTCCC ATGATCATTT TGCCCAGATG GCTGTAGACG CTGTTTTGGC AGTGGCTGAC TTCGAAAGAA AAGATGTTGA TTTCGAATTG ATCAAGATTG AGAAGAAGGT TGGTGGTTCC ATTGAGGACT CGAGTTTGAT CCGTGGAGTT TTACTCGACA AGGACTTCTC CCATCCCCAA ATGCCTAAAC ACGTAGAAGA CTGTAGAATT GCCATTTTGA CATGTCCATT TGAACCTCCT AAGCCTAAGA CCAAGCACAA GTTGGACATT TCCACTGTTG AAGAGTTCAA GGTGTTGCAA GAATACGAGC AAAAGAAATT CCAGGAGATG ATCGACCAGG TCAAGGAATC TGGTGCCAAT GTTGTCGCAT GTCAGTGGGG TTTCGACGAT GAAGCTAACC ACTTGCTTTT AGCCAATGGA CTCAATGCCA TCAGATGGAT CGGAGGTTCA GAGTTGGAGT TGTTAGCCAT CGCTACCAAT GGCCGTATTG TGCCCAGATT CGAAGATTTG ACAGCAGAAA AGCTCGGTAG GGCTGGAACC ATCAAGGAAT TGGAATTTGG TACAACCAGA GACCGCATGT TGGTGATTGA AGATTGTTCC AATACAAAAG CTGTAACCTG TTTCATCAGA GGCTCCAACG AGATGATAGC GGCTGAAGGA GTGAGAGCCT TGCACGACTC TATCTGTGTG GTGCGTAATT TGGTCAGAGA CAGCCGTGTC GTCTACGGTG GTGGTGCTTC GGAGTTGACC TGTTCGATAG CTGTGTCTGA AGCTGCTGAC AAGCAAAAAG GTATAGATCA ATATGCATTC AGAGCATTCG CCGCTGCCTT GGATACTATT CCTATGACAT TGGCTGAGAA TTCAGGCTTG GACCCTATTG AAACGTTGTC AAGCTTGAAG GCTAAACAGG CTATCGAGAA GTCCAGTTAT TTGGGTGTCG ACTGTCTCGG AAAGGGCACT AACGATATGA AGGAGTTGTT TGTCGTTGAT CCTTTGATCG GCAAGAAACA GCAATTGTTG TTGGCCACGC AGTTGACGAG AATGATCTTG AAGATCAATG ATGTTATCAT CAGCGGCAAG GATGAGTACT GATAGAATAA TTGTAGTTCA TAGTTCATGT ATTTAATATA CTATACACTG A
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Protein sequence | MAAPAGLPDM SNAIMAQDEM GRPFIIVRDQ GKKQRKHGLE ATKSHILAAR SVASIVKTSL GPRGLDKILI SQDGDITITN DGATILSQMD LDNEIAKLLV ELSKSQDDEI GDGTTGVVVL AGALLDQALE LIEKGIHPIK VANGFDEACK IAVQQLDDVA DDINISTESS DSNLLKAAKT SLGSKIVSKS HDHFAQMAVD AVLAVADFER KDVDFELIKI EKKVGGSIED SSLIRGVLLD KDFSHPQMPK HVEDCRIAIL TCPFEPPKPK TKHKLDISTV EEFKVLQEYE QKKFQEMIDQ VKESGANVVA CQWGFDDEAN HLLLANGLNA IRWIGGSELE LLAIATNGRI VPRFEDLTAE KLGRAGTIKE LEFGTTRDRM LVIEDCSNTK AVTCFIRGSN EMIAAEGVRA LHDSICVVRN LVRDSRVVYG GGASELTCSI AVSEAADKQK GIDQYAFRAF AAALDTIPMT LAENSGLDPI ETLSSLKAKQ AIEKSSYLGV DCLGKGTNDM KELFVVDPLI GKKQQLLLAT QLTRMILKIN DVIISGKDEY
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