Gene PICST_66007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66007 
SymbolCCT5 
ID4840234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1541703 
End bp1543423 
Gene Length1721 bp 
Protein Length550 aa 
Translation table12 
GC content45% 
IMG OID640391549 
ProductT-complex protein 1, epsilon subunit 
Protein accessionXP_001385649 
Protein GI150866152 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02343] T-complex protein 1, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGTTTACCTC ACAAGCAACA TGGCTGCACC CGCTGGATTG CCGGACATGT CCAACGCCAT 
TATGGCGCAA GACGAAATGG GAAGACCTTT CATTATTGTC AGAGATCAAG GCAAAAAGCA
GAGAAAGCAT GGGCTTGAAG CTACAAAATC GCATATTTTA GCTGCCAGAT CTGTAGCCTC
CATTGTGAAA ACTTCGCTTG GGCCCCGTGG ATTGGACAAG ATCTTAATTT CGCAAGATGG
AGATATCACC ATCACCAACG ATGGAGCCAC TATCTTGTCG CAAATGGATT TGGACAATGA
GATTGCTAAG CTTCTTGTAG AATTGCTGAA GTCACAAGAT GACGAAATTG GTGATGGGAC
CACTGGTGTT GTCGTTTTGG CTGGTGCTCT TTTGGACCAA GCGCTTGAGT TGATCGAGAA
GGGTATCCAT CCCATAAAAG TGGCTAATGG CTTTGACGAA GCTTGTAAGA TTGCTGTTCA
ACAGTTGGAC GATGTTGCAG ACGACATAAA CATCAGCACC GAATCGTCAG ACTCCAACCT
TTTGAAAGCA GCCAAGACAT CCTTAGGCTC CAAAATCGTT TCTAAGTCCC ATGATCATTT
TGCCCAGATG GCTGTAGACG CTGTTTTGGC AGTGGCTGAC TTCGAAAGAA AAGATGTTGA
TTTCGAATTG ATCAAGATTG AGAAGAAGGT TGGTGGTTCC ATTGAGGACT CGAGTTTGAT
CCGTGGAGTT TTACTCGACA AGGACTTCTC CCATCCCCAA ATGCCTAAAC ACGTAGAAGA
CTGTAGAATT GCCATTTTGA CATGTCCATT TGAACCTCCT AAGCCTAAGA CCAAGCACAA
GTTGGACATT TCCACTGTTG AAGAGTTCAA GGTGTTGCAA GAATACGAGC AAAAGAAATT
CCAGGAGATG ATCGACCAGG TCAAGGAATC TGGTGCCAAT GTTGTCGCAT GTCAGTGGGG
TTTCGACGAT GAAGCTAACC ACTTGCTTTT AGCCAATGGA CTCAATGCCA TCAGATGGAT
CGGAGGTTCA GAGTTGGAGT TGTTAGCCAT CGCTACCAAT GGCCGTATTG TGCCCAGATT
CGAAGATTTG ACAGCAGAAA AGCTCGGTAG GGCTGGAACC ATCAAGGAAT TGGAATTTGG
TACAACCAGA GACCGCATGT TGGTGATTGA AGATTGTTCC AATACAAAAG CTGTAACCTG
TTTCATCAGA GGCTCCAACG AGATGATAGC GGCTGAAGGA GTGAGAGCCT TGCACGACTC
TATCTGTGTG GTGCGTAATT TGGTCAGAGA CAGCCGTGTC GTCTACGGTG GTGGTGCTTC
GGAGTTGACC TGTTCGATAG CTGTGTCTGA AGCTGCTGAC AAGCAAAAAG GTATAGATCA
ATATGCATTC AGAGCATTCG CCGCTGCCTT GGATACTATT CCTATGACAT TGGCTGAGAA
TTCAGGCTTG GACCCTATTG AAACGTTGTC AAGCTTGAAG GCTAAACAGG CTATCGAGAA
GTCCAGTTAT TTGGGTGTCG ACTGTCTCGG AAAGGGCACT AACGATATGA AGGAGTTGTT
TGTCGTTGAT CCTTTGATCG GCAAGAAACA GCAATTGTTG TTGGCCACGC AGTTGACGAG
AATGATCTTG AAGATCAATG ATGTTATCAT CAGCGGCAAG GATGAGTACT GATAGAATAA
TTGTAGTTCA TAGTTCATGT ATTTAATATA CTATACACTG A
 
Protein sequence
MAAPAGLPDM SNAIMAQDEM GRPFIIVRDQ GKKQRKHGLE ATKSHILAAR SVASIVKTSL 
GPRGLDKILI SQDGDITITN DGATILSQMD LDNEIAKLLV ELSKSQDDEI GDGTTGVVVL
AGALLDQALE LIEKGIHPIK VANGFDEACK IAVQQLDDVA DDINISTESS DSNLLKAAKT
SLGSKIVSKS HDHFAQMAVD AVLAVADFER KDVDFELIKI EKKVGGSIED SSLIRGVLLD
KDFSHPQMPK HVEDCRIAIL TCPFEPPKPK TKHKLDISTV EEFKVLQEYE QKKFQEMIDQ
VKESGANVVA CQWGFDDEAN HLLLANGLNA IRWIGGSELE LLAIATNGRI VPRFEDLTAE
KLGRAGTIKE LEFGTTRDRM LVIEDCSNTK AVTCFIRGSN EMIAAEGVRA LHDSICVVRN
LVRDSRVVYG GGASELTCSI AVSEAADKQK GIDQYAFRAF AAALDTIPMT LAENSGLDPI
ETLSSLKAKQ AIEKSSYLGV DCLGKGTNDM KELFVVDPLI GKKQQLLLAT QLTRMILKIN
DVIISGKDEY