| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65867 |
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| Symbol | MDR1 |
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| ID | 4839899 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 284746 |
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| End bp | 289562 |
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| Gene Length | 4817 bp |
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| Protein Length | 566 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391214 |
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| Product | multidrug-resistance transporte |
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| Protein accession | XP_001385395 |
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| Protein GI | 150865965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCAATTTTTG TTTGCTCACT AACTACAGTA ATACCTTACT AAAGTTGACG TAAACACAAT
GTCTCGTGAT TCGTCTACTG AAGCTCCACA GGCGCTTGTG GAAGATCCTG AAAAGCAGCT
GCAAAAGAAA GTCTTCATTG AGAGTGATGC CGGTGACGGA ACCAAGAGAG AAGACCAATA
TTTGCATGGT ATCCATTTGG TGATTTGTTT TGTCGCCGTT TTCTTGTCCA TGTTCTTGGT
GGCTTTAGAT CAAACCATTG TCACTACAAT TTTAACCACT GTCGGAAACA AGTTTAATGA
CTTTGACAAG GTCGGCTGGT TAGCTTCGGG GTTCTTGTTG GCTATGGCTG TATGCATTCA
GCCGTTTGGT AAATTCTCCA TTATCTTTGG AAGAAAGTAC ACTATGGTCA CAGCAATCGT
TTTGTTTGAA GCTGGGTCGT TGATGTGTGC TCTTGCAAAG AGTATGAATG TTCTCATTGG
TGGTAGAGTT TTGGCTGGTG TAGGTGCCGC AGGTATCCAA GGAATGGTGT TTGTGATCAT
TTCCGAAGTA GTCCCTATTG AAAAGAGACC TATCGGTATG GCCATTATCA GTAGCGTTTT
TGCTGTGGCC TCCGTCTTGG GTCCTTTGAT TGGTGGTGCC TTCACCTCTC ACGTGTCCTG
GAGATGGGCT TTCTACATCA ACTTGCCTAT TGGTGGTATA GCTCTAGCTT TCTTGTTGTG
GGCTTTCAAC CCTCCTAGAC CCACCTCTAG TATTGTGGAA GAGTTGAAGA CTTTTGATTA
CTTTGGAACT TTCTTATTGA TTTCTGGGTG TGTTATCTTC TTGTTAGCAT TGACTTTCGG
TGGAAGCGAT TTCAGCTGGG ATTCGGCTGC AGTGATTCTT TGTTTTGTTC TTGGAGGTCT
TCTTATTATA GCATTTATCA TTTGGAATGG ATGGTTCTCC AAGAACCAAA TCATCGCCGT
TGAGGTGCTC AAGATCCCCC AGATCGTTGC CTCCACTTTT GCACTTTCCG GTGTTTTCGC
TGCCTTCATC CTTTCCATGG TGTTCTTGCC TATTTACTTT CAGGTTATAC ATGGTGCCAG
TGCAATGGGT GCCGGTTTGC ATTTGCTTCC CATGATTGTT GCAGTTGTCT TGTGTTCAAT
AATAAGCGGT GTAGGAATCC AAAAGCTGAA ATACGTCAAA CCATTCAGTG TGGCTGCTGG
TATTCTTGCT CCAGTTGGTT TCGGTCTCTT GGCTATTCTT GGAGTTGACT CTTCGTTTTC
GGCTCAGGTT GGTCTTTTGA TTATCGGTGG TATTGCGGTT GGTGCCCAAA TGCAGCCTGC
TATAGTCAGT GCGCAAATCT GTGCTCCAAA GACGCCTGGT TCTACTATCA TGGTCACTGT
GTTCTTGAAC TTCAGCAGGT CCATTGCATC GGCTCTTGCT GCTGATCTTG GTGATGCTAT
CTACGCCTCT TCGTTTAAGA ACTACTTCAA GAAGGCATTC AAAGCTACAA CCAACACCAC
CATCTTGTCT GATTTACAGG ACGTTGACAT TTCGGAATTG GTGTCCAACA CGTCGGTCCT
TGCGCAGTTG AATCCTGTCA CTCAACATTT CGTCAAGACC CAAATTGTCA AGGCCATCAG
AAACGTGTTC TACATGGGTA TTGGGCTCTC TGCTATTACA TTCATCGCAT GTTTCTTCGT
GACTAACAAG AAGTTGCCTG ACATGAGTGG TGGAGCAGCT AATGCTGCAG ACAAAGAGGG
AGAAGAAAAA GAAGAAAAAT CTGAATCGCC TTCTGACTCA AATGACGTTC AATCCGAAGC
AGCTGTTCTC AAAATTGCAG AAGATGCCGA CTTCGAAAAG AGAAGCATCC AAGCATCTGG
CGACGAGTCT TCTACAACTA TTACCCGCAA GTAAATGCAT AAAAATTGCG ACGGAGATCG
CACGTATAAT GACAATAATA GAGACAAAAT CTCGACAGTT CCGACACAAT AACACTAAGT
GAAACATCAT TCCAACAACT ACAATCTGCT GAGTTTTTCC GTGTACATAT ACAAGCAAAG
TTACTGGGGT CACATTAATT CAATACAAAT AATATAGAAT AAACATACTT TTTAGATTGT
TCGCCTTGCC ATGCAGAACA TGTAGCTACA GCAAAAAAGC GGAAAACAGC AACCTAGCGA
AAAATGATAA AATGTAACGT GTAGTATCTA ACACAAAGAA GACCAGCAGG GTAAATCTAG
ACTAGAGTAG CCAATTTACG AAAACAGAAG ATGTTGTACT GGTGGCGCCA AAGTCGGCAC
GTTTGTGTAA ACGGCTCTAT TGTCCGCTTG GAGAGATCTT CAGAAACAAT GGCTCCAAAG
TGGTTGCGAG AAATCGCGAA TGCTCGGGAA AGTGCGGTCG GACGCCGAGC ACCACACACA
ATCTTTATCT TCATGGTCCA CAATGGCAGG GCCAAGGTAG GCTTGGGAGG CAGCGAAAAT
TGTTGCGATA ATTGCACCAG TGGAGCCAGG AGATCCAGGG AGATTGTCTG GGGATAAAGA
CGTTGACCGG GCAGCGGAAA TGCCCAGTTA CAGCTACAGA GGCAAGAAAT GTGCGTACTA
TTTGGGGCCG TACGATCAGT TTAGATCGGA CATCTGAACC AACAGAGCCA GTTCCAAATT
CCAGCCAGCC AGAGAGAGAG AGGAAGAAGG ACGATTAGCC ATGGCTGTTA TCTAGACAGA
CTAGATAGAG TACGAGGGGT AGAGATCTGG CAGAAGGGGA CCCCTCTCCA GTGAAGGGAA
TTTTGGGACT GGAGGGGAAT GGCTTGGATA TTTCCTAATT GATCGGGCAC ATGTATTCTT
CAGCATTTGA GACAGTTCAC CGAAACAGCC CAGATTAATT TGTTAGCGGT TACGGTGACA
CCATAGGATC GTATAGCCTA ATCCGGCGGA ATGGAGCGAT GGTCGGCGGT GATTGGTCAG
CTGCCTCTCG TAAACAAGAA AATAACCCCA GCATCACTCT GTGGAATTGC AGACAGTGGT
CAGGGCGAGC AGATAAAAGT GGGGACAGAC CCCCATGCAG TCATCCAGCA ACAGCATGAA
TTGCATCATT TTACACGGTA ATTTTTCCTG GTGACTGAGT GATTTTTCTC GAGGGTTAAT
CCCCGTCCCA AAGAAAATGT CAGTGAATTA GTTAATGAAA ATATTAATAT TATTAGCAGC
TAGCAATCAG CTCTACCAGC CAAATAATGG CCTGGGGTTA TGGAACAAGA GCCATGTAGT
CTTTCTTTTT CCGAGCAAAA GTTATATTAC TCTTTTTGGT TTTTTTCTGT TTCTCGCTGT
GTAACTCACT CTTTTGCCTC AGGTGTTTTC TTGACCAGAA CTACTTCTCT TCTTCGGCCT
CACTTTTTTC TTCTGTAGCC GCCTTTCTGT TTGACTGTAT CTCCGCGTTG CCGTTGAACT
GTCTGTTTGT GTGAGACGAG CAAAGTCATA CAAATTCGAG TTTTCCCAGC TCTCTCAACT
GACGTTCTGT GCGTGTATTT GCAAACTTTT CCAGCAAGAG CTATTTTGTC ATATCCAACA
AAACAGACAC CATACGTCTA CTCTTCTTCA TCTACATCAT CTTCACTTCT TACACGTCCC
TTACATCCAG CTTTTAAGTC TTCATCTTGT TTGCTTCAGC TCAGCTTTAG CTTTATTTAA
GTCCCGCAAA AAAATCAACC CACAACCAAA ATGGATTCTA CCAACTTTTC CCCAGAAAGT
ATTGGGTCTC CGTTGTCTAG TTTTTATTAC CCTTCTTTAA GTCCATTTTC CACCGCCTCC
GACACGGCTT CTACCTCGAC CTTGCCATCC ACAACTTCGT CGATCCTTTC CGCTCCTTCG
CCGACCCCAG AGCCTCTTCC TGTCAAGCCC AAGGCTAAAC CCAAAAAAGC TCCAAAAGTC
GCTAAAAAGC GTAAGTCGGT CTCTTCAGAC TCAAAGCCTT CGAGATCTCG TTTTGGCTGC
GAAGAATGCA AGACCAAGAG AATCAAATGT GATGAGACAA AGCCCAGGTG CTCCAGATGT
AAGTCCAGAG GCATCAGATG CAACTACAAA ATCACCTTGA AATTCAGAGA AGACCTCGAA
GAACAAGGTA AAAAGTTTGG TAGAGAAGGT GTCTGGTCCA AAGATGGTGG AAACGCCAAC
TCCAGCAGCG ATCTTGTATT GAGGAGTAAA GATTCCTACT ACCAGAATAT CCGTAACATC
AGAAAGTTGC AGTTCATTAA TACCCAGTAC CGCGATATAC TAAACTTGCC TGACCGGTTG
GTTCCCTCTC TACAATCGTC GATTATCCCC GTAGATATCC TTCACTCGTT AACTGATGAT
CCTCTGAGTT TAAACTTTGC ATTAACCTAC TACATTAGCT TCGTGTCCCC CATTCTTAAC
CCAGTGGGAA ACCAGTCGAA GTACTATAAC CTACAGTCCA AGAAACTGAA CAAATACATC
GTCGTTGAAA AAGGTTTGGA TTTGTCATCC TTGGTTCAAT ATTCCCAAAA TAACAATAAT
TTATTCTATC TTATTCTTTC TCTTGGTTCC ATATACTTGT CGAAATTGGA CGGCTTTTCC
GACAATAACT GGATGTCGAA AGCAAAATAC TTCCAGGAAA TGGGTATTGC CCGTATCAGA
AATGAATTGT ACGATTTATT CAACGAGGGT GGAATACACT CTCCTAAACT ATACACAACT
GATGTCCTTA TATCTCTTGT GCTACTTATC TTGTACGAAC TTGCAAACGA CTGCAATCGT
CAGTGGACAG TTTACTTAAA AATGTGCAAA AAGATCATCA ACGATCCACA GTTCAATTTA
CCCCACAATT CGCTTGA
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| Protein sequence | MSRDSSTEAP QALVEDPEKQ SQKKVFIESD AGDGTKREDQ YLHGIHLVIC FVAVFLSMFL
VALDQTIVTT ILTTVGNKFN DFDKVGWLAS GFLLAMAVCI QPFGKFSIIF GRKYTMVTAI
VLFEAGSLMC ALAKSMNVLI GGRVLAGVGA AGIQGMVFVI ISEVVPIEKR PIGMAIISSV
FAVASVLGPL IGGAFTSHVS WRWAFYINLP IGGIALAFLL WAFNPPRPTS SIVEELKTFD
YFGTFLLISG CVIFLLALTF GGSDFSWDSA AVILCFVLGG LLIIAFIIWN GWFSKNQIIA
VEVLKIPQIV ASTFALSGVF AAFILSMVFL PIYFQVIHGA SAMGAGLHLL PMIVAVVLCS
IISGVGIQKS KYVKPFSVAA GILAPVGFGL LAILGVDSSF SAQVGLLIIG GIAVGAQMQP
AIVSAQICAP KTPGSTIMVT VFLNFSRSIA SALAADLGDA IYASSFKNYF KKAFKATTNT
TILSDLQDVD ISELVSNTSV LAQLNPVTQH FVKTQIVKAI RNVFYMGIGL SAITFIACFF
VTNKNLLKNV QKDHQRSTVQ FTPQFA
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