Gene PICST_62543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_62543 
SymbolSNA1 
ID4839888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp62736 
End bp63422 
Gene Length687 bp 
Protein Length228 aa 
Translation table12 
GC content45% 
IMG OID640391203 
Productaries arylalkylamine N-acetyltransferase 
Protein accessionXP_001385700 
Protein GI150866192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.854998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT TTCCTCCCAA TTTGTCCATT AGACCTTTGA CCATCGAAGA CATCGACAAG 
TGTGTCGTCT TAGAGAACAA GGGCTTTTCC GAGTTTGAAA GATGCACCCC CGAAAAGTTC
AAGTACAGAT TGAGAGTTTG TCCGGAATTG TGTTCTGGAT TATTCATCAG AGACTACGAA
TACAAGTACA ACGCTATTAA TTTGCCGGAA GTTGCCGATG CGTTGAGCAA AGAAAACAGC
TCCAACGATG ATTCAAACAC AGAAACCAAT GACGATGATC TCAATGAGTT ACCTGCCAAG
TCTTCTGTGA CTAAAGAGAC GTTAGTAGGG CACATCATCG CCACCAAGAT CCACTCGTCC
GTTATCACCG GTCTGGCCAT GGAATTGCCC TCGGCAGAAG ACCCCACCGC AGGTCATTTT
GAGGGCTCGA GAACTGTAGG CATCCACTCT GTAGTGATAG ACCCGGAATG GCAGGGCAAG
AACTTGGGAA CGTTGTTGTT GCACGACTAC ATCCAGAAGT TATCCAACCA GGACTTGGGA
GACAAGGTAG TGATCATAGC ACACAAAGAG TTGATTCCAT TTTACGAGAA AATCGGCTTC
AACAACTTGG GAGAAAGCGA TTGTAAGTTT GGAGGAGATA CCTGGTACGA TATGGCTATT
GATTTGATTG CTGAAGACGA TATCTAA
 
Protein sequence
MSDFPPNLSI RPLTIEDIDK CVVLENKGFS EFERCTPEKF KYRLRVCPEL CSGLFIRDYE 
YKYNAINLPE VADALSKENS SNDDSNTETN DDDLNELPAK SSVTKETLVG HIIATKIHSS
VITGSAMELP SAEDPTAGHF EGSRTVGIHS VVIDPEWQGK NLGTLLLHDY IQKLSNQDLG
DKVVIIAHKE LIPFYEKIGF NNLGESDCKF GGDTWYDMAI DLIAEDDI