| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62413 |
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| Symbol | |
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| ID | 4839743 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 74694 |
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| End bp | 77384 |
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| Gene Length | 2691 bp |
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| Protein Length | 848 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391058 |
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| Product | predicted protein |
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| Protein accession | XP_001385704 |
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| Protein GI | 150866195 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.776839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGG AGCCGGTCTC GTTCAGACTG ATAGCTGATT TGAATAGTCT ATCTAAATCC
TTGCTTCGGG ATTTGATCAC AGGTTCATCA GGCATATCGA AACTTATTAA GCATCAAGTG
TCTCTTCTTG AGTTGTACTC TCATGAATCG AAGAAGCTCG AGAGGATCGG CTACTGTGAC
TATGAACTTG CCTATGTTTG CTACACGTTG GCGTTGCTGC TTTATACGAA CCTGGAGAAA
CTACTTTCAG AAAAGACTGT GGACTTTGTG CGATCGATTA AACAGAATCT CGTGATAAGA
AAAGACAGTT ACGAGACGAT AAGGTCATTT CTCGATTCTA ATGAGAATGA GACTAATGTA
GATCCCCTGA ACTTGGGTTC TTATGGTGGC GATCCTTTAT TACAGAGGTT CAAATCACTT
CAAGCAGGTT CTGATTCTTC AGTTTCTGTT GGGCACGTAA AGGCAAACTT AAAACTGCTG
ATGGACAATT TCAAGTACAG AGAAGTGATA TTCGTTGAAG AATTGCACAA TATCATCAGT
CTGACATCTT CTAGCAAAGT CCTTTTGATA GACTATAGAG CATCGAAAGA TTTCAACTAC
AATCATATCA AACATTCGGA AATCATCAAT ATCGAGCCAT CTCATATAAA TGCAATCTTT
TCACAGAATA AAGACGTCAC CGATCAAGAC TTAGAGGAAC GGCTAAAGCT CCATTTACTG
CAGGACCAAT TCCACAAATT CCAGAATAGA TACAAGTACG ACTTAATAGT CATCTACAAC
TTGAAGTATG GCACCCATAT GTCGCATATG GACCGATTTG CATATCTCAA GGAAGTCCTT
TTGAACGAAG ATTCAAGTGC ACTTCCTACG AGAAACCCCT TCAATAATTT GGTAGAATTG
ATCATGTTCA AGAACAAGTA CATTAGCTCC AAGTTGAAAC GGCATCCATG TTATTTGGCT
GGCGGTGTAT TCCATTGGCA TTCGGTGTAT GGGGACGACA GTTTGTCAAG ATCAATTCAA
GCTCAAGTAT TGACAAGACC AGAGGCTAGT TTATCAAGAG GAAGCTCGCC CAATTCTTCT
CGTAGAAGTA GTTATACAGG CACTTCCTAT GGAAATTCTT CTTCTATTGC TCGAACTTCT
TCTCCCTATC TTAAGAACTT TGGCGAGTAC TTGCTGACAG CAAAGTCTAC AGATGATACT
CCAATATCCA ATGCATTCGT GCCTATTATT CCTTCGGCAA GTATGTCCAA GTACAACCCT
TCATCGGCAA TTAAGTCCAG CACTTCTAGT AGTACGATTA CGACGACAAA TGTTTCACCT
CCAATTCAGC AGCCACCAAC CGTCAAGAGA ACACTTTCAG TCACAATTCC TAACAACTCT
TCATCTTCTT CGACGACTAC ATCAATAACA GAAAAGCCTA CTATTGCGTC TGTAGCCGGT
ATAACTACAA ATAACACTCC CAGCAAATTC CTTGATCTGT ATGTAACTGG TTTGGTAAAT
TTGGGTAATT CTTGTTACAT GAATTGTATT CTACAGTGTT TGGGTGCAAC TCCTCCTCTT
ACAAAGTTCT TTTTCCCAGG TATTTCCAAC AGTTTGCCAT CGTCGTCACA GGTTCAATCT
TATCGTCAAC ACATCAATGT TAACAACAAA TTGGGATCTA AAGGTATTAT GACCACAAAC
TTCTTTGGGC TATTAGCCAA TATGTTCAAC AGTAATGGGA AGTCGTATTC ACCTACAAAT
TTTAAGAAAG TGATGGGATC CTTATCCCCT GGAGGACAGT TTGCCACATT TGACCAACAG
GATTGTCTTG AATTCTTGAC TTTTCTTCTT GATGGTTTGC ACGAAGACTT GAATCAAATG
GTGATATCAA ATCCTGAAGA AAAGAAGGCC ATATCAGAGC TCACGCCTGA ACAAGAGAAA
ACGAGAGAAA TCTTACCTGT TCGTTTGGCT TCCACAATTG AATGGGAGAG ATATTTGAAG
CTCAACTTCT CAATCATTGT CGACTATTTT CAGGGTCAGT ACTTGTCGCA ATTGAAATGT
TTGGAATGTG GAATGACTTC AACCACCTAC AATGCTTTTT CGGTTTTATC ATTACCTATT
CCTGAAAAAC TTGGCTATTC AACTAACCAA AGAGTTCTGT TGGATGATTG TCTTAAGGAG
TTTACAACTA CTGAATTGTT GGATGACAAC AACAAATGGC ATTGCCCTCG TTGTAAGAGA
TTCACCAAGC TGACGAAGAA GATCACTATC ACACGTTTAC CGCAGATCTT GATTATTCAC
TTCAAAAGAT TTAAGATGAC TCCCAATGGT TACTTTAACA AGTTGGATAC ATTTGTCAAC
TTTCCAGTTA AAGACACTCT TGACTTGACA TCTTATTGGC CAGATGTTGG TACCAGTGTC
AATTCGAATC TCAAGGATTC TGAGATCATG AGTAAAGAGA AAGAAGAGCA GATTTTGTCA
ACATTGCCCA GCAGAAACCA ACAGAAACCG TTCCGCTACA AGCTTTACGG TGTTGCTAAC
CATTTTGGAA ATTTGACAAC TGGCCATTAC ACTTCTTATA TTCACAAGGA AGGTGAGTCA
AAAAAGACCA GAGGCTGGAT CTACTTTGAT GATGCCAAGC TTACTTACAA TTGTAAAGAA
AGCGACGTAA TGAATAAGAA TGCCTACTGT CTTTTCTATC AACGTATCTA A
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| Protein sequence | MTEEPVSFRS IADLNSLSKS LLRDLITGSS GISKLIKHQV SLLELYSHES KKLERIGYCD
YELAYVCYTL ALSLYTNSEK LLSEKTVDFV RSIKQNLVIR KDSYETIRSF LDSNENETNV
DPSNLGSYVS VGHVKANLKS SMDNFKYREV IFVEELHNII SSTSSSKVLL IDYRASKDFN
YNHIKHSEII NIEPSHINAI FSQNKDVTDQ DLEERLKLHL SQDQFHKFQN RYKYDLIVIY
NLKYGTHMSH MDRFAYLKEV LLNEDSSALP TRNPFNNLVE LIMFKNKYIS SKLKRHPCYL
AGGVFHWHSV YGDDSFYTGT SYGNSSSIAR TSSPYLKNFG EYLSTAKSTD DTPISNAFVP
IIPSASMSKY NPSSAIKSST SSSTITTTNV SPPIQQPPTV KRTLSVTIPN NSSSSSTTTS
ITEKPTIASV AGITTNNTPS KFLDSYVTGL VNLGNSCYMN CILQCLGATP PLTKFFFPGI
SNSLPSSSQV QSYRQHINVN NKLGSKGIMT TNFFGLLANM FNSNGKSYSP TNFKKVMGSL
SPGGQFATFD QQDCLEFLTF LLDGLHEDLN QMVISNPEEK KAISELTPEQ EKTREILPVR
LASTIEWERY LKLNFSIIVD YFQGQYLSQL KCLECGMTST TYNAFSVLSL PIPEKLGYST
NQRVSLDDCL KEFTTTELLD DNNKWHCPRC KRFTKSTKKI TITRLPQILI IHFKRFKMTP
NGYFNKLDTF VNFPVKDTLD LTSYWPDVGT SVNSNLKDSE IMSKEKEEQI LSTLPSRNQQ
KPFRYKLYGV ANHFGNLTTG HYTSYIHKEG ESKKTRGWIY FDDAKLTYNC KESDVMNKNA
YCLFYQRI
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