| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62296 |
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| Symbol | SIN3 |
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| ID | 4839932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 527655 |
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| End bp | 531341 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391247 |
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| Product | transcription regulatory protein |
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| Protein accession | XP_001385789 |
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| Protein GI | 150866255 |
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| COG category | [B] Chromatin structure and dynamics |
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| COG ID | [COG5602] Histone deacetylase complex, SIN3 component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.117912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATT TCAAGTCGCA GAGTATCGAC ACTCCAGGCG TCATCGACAG AGTATCTACT
TTGTTCAGAG GCCATCGTAA CTTGATACAA GGCTTCAACA CCTTTTTGCC ACCTGGATAT
CGCATTGAAT GCTCTTTAGA TCCGTCGGAC CCCAATCCGA TTAGAGTCAC GACGCCTACA
GGTACCACTA CCAGACCCAA TATCAACAAT GGCACCTATG GTCAGAGATG GGGCAACGAA
GAACAAGGAC ATCAGCAAAT TGCAGCTGGT CAATATTCTC AAGACCAGCA GCAGCTTCAG
GCTCAACACC AGATGCAACA ACAGGTTGCT GAAAATGGAG GCGGCCAGAT CGAATTCAAT
CATGCTATTT CCTATGTTAA CAAGATTAAG ACTAGATTCG CTAACCAGCC AGATATTTAC
AAGCAGTTCT TGGAAATCTT GCAAACGTAC CAGAGAGAAC AGAAACCGAT TGCCGAAGTG
TACGAACAAG TAACAGTTCT TTTTGCCAAT TCGCCAGACT TACTAGACGA CTTCAAACAG
TTCTTGCCTG ACACCAGCAA CCAAGCCTAT GTTCAACAAC AAGCTCAACA GCAAGCAGTT
ACTGAAGGAG CTTACTCTGC CAATAATGCT ACTGCGCAGT TACCTCCAGT AGGCAACTTT
CAGCCTCCTA CCGGCTTGAG TCCTAGTGCT GCTCAGCCAT ATCCTCAACA AAACTTTCAA
GTACCTTCTG GTAATCCTGA GCCACATGGA ATAACTGTAG TTACCGAACA AGAGTTGCCT
AAAAAGAAAA AGTCATTGTC AGAAGGATAT ACATACGACA ATTATGAAGA TGCTCAAATC
TCGAGCGTCA GAGGAGGACC GCAGGTCAAG ACTGGTACTA CGAAGGCAGT CGCTTCTGGT
AAGAATGGGC CTGTATCTAC AATTACAGTA AATCCAACAT TAGTGCCAGG AATTCCCGAG
CCTGTTCCAC CTTCTGCCAG TGTCAAAACG TCGTCTCTTC TGGAAGAAAT CTCATTCTTT
GACAAGGTCA AGAAGGCTAT CGGCAACAAA CAGAGTTACA ATGATTTCTT GAAGATCTTG
AATTTGTATT CACAGGAAAT TATCGACAAG AGAACTTTGG TCGAAAGAGT AAATGGCTTC
ATTGGCGACA GCCACCCAGA CCTATTCAAC TGGTTCAAGT CCTTTGTAGG CTACGAAGAG
AAACCTCAGC ACATCGAAAA CATCACATTC AAAAAGCATC AATTGGAGTT GTCATTGTGT
AAAGCATATG GTCCATCCTA TAGACAATTA CCCAAAGCTG AGACCTACAT GCCTTGTTCT
GGTAGAGATG AAATGTGTTG GGAGGTGTTG AATGACGAAT GGGTCGGACA TCCAACATGG
GCCTCTGAAG ATTCTGGGTT CATTGCTCAT CGTAAAAATC AATATGAAGA AATTTTGTTC
AAGATTGAAG AAGAAAGGCT TGAGTTTGAC TACTACATGG AATCCAATTT GAGAACTATT
CAGATTTTGG AGACTATTGC CAATAGAATA GCAAATATGA CCCCTGAGCA AAAGGCAAAC
TTCAAATTGC CTCCAGGATT GGGACACAAT TCCACAACTA TTTACAAAAA AGTTATCAGA
AAAATCTACG ACAAAGACCG TGGGTTCGAA GTAATCGATG CTTTGCATGA GAACCCGGCC
ATTGCCGTTC CCATCGTTTT GAAGAGATTA AAACAAAAGG ATGAAGAATG GAAGAGAGCT
CAAAGGGAAT GGAACAAGGT TTGGAGAGAA ATGGAGCAGA AGGTATTCTA CAAATCGTTG
GATCATTTGG GTTTGACATT CAAGCAAGCT GATAAGAAGT TGTTGACCGC CAAGCAGCTT
GTGAGTGAAA TCAGTAGCGT CAAGGTTGAA CAGCAAAACA AGAGATTGCA CCCTCTAACT
CCCAAGCCAC AAGAACAATT GAGCTACGTT TTCAAAGACT ACGATATTTT GAAGGATATT
TTGAAATTAG CTGATGTTTT TATCAACCGT TCGTCTAACT ACTCTTCGAA TGACAGAGAC
AAGTTGACCC AATTCTTCCA ATTCTTTGTT TCGTTATTCT TTGGTATCCC TACTGAAGAT
ATCGAAAGGG CTTTAACGTC TAGAGGTAAA TCCGAGAAAA CCACTGCTGA TGAAACTGAT
GAAAATGGAA CCACTTCCGA AAATGCAGAA GCCAGTGGTC AATCACTTAT TCCTAAGAAG
CGTAGCCGTG AATCTGATTT GTTACGTGAT GTCTTGAAGA AACAATCAAA GTCAAAGAAA
GATGAACGCT CTGATTCTCC TACTCCACAA AGTAACGATC TTGAAGAACA GGAATTGGTC
GATGAAGTCG AGAAGTCCAG CGAATTGTGG ATCAAGACTG CCAACACAAA GTTTTCCTTG
AATGACGATG ACAGTGATAC CAAACGCGAC AAGTACAACT TCTTCTGTAA CACTACTATA
TATGTCTTTT TCCGCCATTT GAGAACTTTG TATGAACGCT TGGAAGAAAT CAAGGCTATG
AATGAGGAAG TTGGTAAGGA AATCAGAGCT CGTAGACATC CTCGTTTTGC CAAAGATTTG
AATTTACTTT CTCACCAACT TGAAGACATG GGTGTCGAGA TTCTTGGAAC TAAGGATTGT
TACTTGCAAG TGTTAGAGTT GTCGGAAAGA TTGATTGAAG GTGAGATCGA GCACCAGTGG
TTCGAAGAAT CCTTACGTCA AGGGTACAGA AACAGAGCCT ACAAAGTCTA CACAGTAGAC
AAAGTTGTTC AAGCCATGGT TAAGCACATG CATTCAATGG TAACTGATTC CAAGACGTCG
GAAATGATGG TTTTGTATGA GTCTGACAGA TCCAGTCCAA CGTCTACAGC AAAGGATCAA
ATCTTGTACA GAATGCAAGT AAGAGCTTTG ATGTCAACTG ATGAGAATAT GTTCAAAATT
ACGTTTAAGG AGAGTACCAA CAGCGCCAAC ATTCAGTTTG TGAGCTTAGA TGATTTGACT
ATTAATGACC ACGAAAATGC AGAAGAGGAA TACAACTACT ATGTTACAAG TTACGTTATG
TCCCATCCTA CTGAAGGTGT ACCAGCTTCA AAGATTAACA TGCCATTTTC GAGATCTTTC
ATTGAGTCTG TTGATGAAGA TCAAGTGGAA GGTAGAGTAT CGTCTGGATT GAAGGTTTCT
GTTTGTGAAA ACTCGTACAG ATTGTTTTTT GAAGCAAACT CCCATGATGA GTTCACTTCA
AAGGTTGTAT ACAACAAGCA AGCAGAAGAT GGAAAGAAGA AATCCGAAAA GGTTGATGCT
TTGAGAAAGC TAATCAACGA TGACGAGGTT GGTTGGAAAC GCGGTTTGGC TGGTGACGAG
GATGCTAACC TCTTAGATCA GCAAGCCAAA GCTCTCTTTG AGAAAGGTAG CTCTGCGTAC
TTTCAATTTT CAACAAAAAA GGAAGTTGTT GAACCCAAAA AAGAAGCCGA ACCCCACACT
GAGGCTGTTG CTCAAGTTTC AGAAACCGAA ACAAGGCATG ATGCTGATGC AACTGTTGTT
CAAGAAAATA ACGACACCAC TATTCAACAA GATGTCAATG ACACAACTAC TGATGAGACC
ACTGTTAATC AGGATGACGC TAGTATCATA GCCGAGGGTC AGACTGAACA TTCCACCATT
ACTGTAATTC CAGGTAAGGA GGCATGA
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| Protein sequence | MKDFKSQSID TPGVIDRVST LFRGHRNLIQ GFNTFLPPGY RIECSLDPSD PNPIRVTTPT
GTTTRPNINN GTYGQRWGNE EQGHQQIAAG QYSQDQQQLQ AQHQMQQQVA ENGGGQIEFN
HAISYVNKIK TRFANQPDIY KQFLEILQTY QREQKPIAEV YEQVTVLFAN SPDLLDDFKQ
FLPDTSNQAY VQQQAQQQAV TEGAYSANNA TAQLPPVGNF QPPTGLSPSA AQPYPQQNFQ
VPSGNPEPHG ITVVTEQELP KKKKSLSEGY TYDNYEDAQI SSVRGGPQVK TGTTKAVASG
KNGPVSTITV NPTLVPGIPE PVPPSASVKT SSLSEEISFF DKVKKAIGNK QSYNDFLKIL
NLYSQEIIDK RTLVERVNGF IGDSHPDLFN WFKSFVGYEE KPQHIENITF KKHQLELSLC
KAYGPSYRQL PKAETYMPCS GRDEMCWEVL NDEWVGHPTW ASEDSGFIAH RKNQYEEILF
KIEEERLEFD YYMESNLRTI QILETIANRI ANMTPEQKAN FKLPPGLGHN STTIYKKVIR
KIYDKDRGFE VIDALHENPA IAVPIVLKRL KQKDEEWKRA QREWNKVWRE MEQKVFYKSL
DHLGLTFKQA DKKLLTAKQL VSEISSVKVE QQNKRLHPLT PKPQEQLSYV FKDYDILKDI
LKLADVFINR SSNYSSNDRD KLTQFFQFFV SLFFGIPTED IERALTSRGK SEKTTADETD
ENGTTSENAE ASGQSLIPKK RSRESDLLRD VLKKQSKSKK DERSDSPTPQ SNDLEEQELV
DEVEKSSELW IKTANTKFSL NDDDSDTKRD KYNFFCNTTI YVFFRHLRTL YERLEEIKAM
NEEVGKEIRA RRHPRFAKDL NLLSHQLEDM GVEILGTKDC YLQVLELSER LIEGEIEHQW
FEESLRQGYR NRAYKVYTVD KVVQAMVKHM HSMVTDSKTS EMMVLYESDR SSPTSTAKDQ
ILYRMQVRAL MSTDENMFKI TFKESTNSAN IQFVSLDDLT INDHENAEEE YNYYVTSYVM
SHPTEGVPAS KINMPFSRSF IESVDEDQVE GRVSSGLKVS VCENSYRLFF EANSHDEFTS
KVVYNKQAED GKKKSEKVDA LRKLINDDEV GWKRGLAGDE DANLLDQQAK ALFEKGSSAY
FQFSTKKEVV EPKKEAEPHT EAVAQVSETE TRHDADATVV QENNDTTIQQ DVNDTTTDET
TVNQDDASII AEGQTEHSTI TVIPGKEA
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