| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62134 |
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| Symbol | |
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| ID | 4839894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 79942 |
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| End bp | 83475 |
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| Gene Length | 3534 bp |
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| Protein Length | 1178 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391209 |
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| Product | predicted protein |
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| Protein accession | XP_001385349 |
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| Protein GI | 150865932 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCCA AAAAAGCAAA TATCAATACG TCGAAATGGC CCCCGTCGTT CCAAAGATTG
TATAGGCTCT TTGTCCAGAT CAATACCCAT TTGACTTTTC TTTCGTCTCA TTCTAGAACA
ACCATACCGA CATTTGAACT TCTTCAGAAA CTCAATCCTG ATATCAACAC GCTTGATTTG
ACATTAATGA AGGGTTTACT TCCCGATAAA CACGTTGCTT ACAAATATGT GGACGAGAAT
CAACTCATGC TATCTATGGC AGAGAAAGTG GAGTACAGCA GATCACACGG CTATAAGCAG
GGGAATGCTA GCTCTATGGA TGATGCCTTT GAACAAGTAG CGAACAACCA TGGCCTCTCT
GGCTCCAATC AATTACTCGT ATTTGACTTC CAAGACACAA GAATGCACGG AATAGGTGGC
GTAGTAAAAG GAGGCAGGGC CAAAAGAAGA AAGGTAGAAC AGAATGATAC TAATAATGAT
TTCTTTCTTT CCAGTTCGGA TTTGGCTTTT CTGCCTTTGA CTCAAATCCA ACTAACTAGA
ATGATTAACA GTAGATCCGA CAACTTCAAA GAGATACTAA AGGCATATCT AGATGGATTT
AGTGAGGAAG AAGTTTCACA AGATATTCCC ATGCAAAAGT TGGTTGCCAA ATATGAGCCT
TTAATACCGC AACCTCCTGT TTTGAACGAT CCAGTAGAAC AATTGGAACA TTCGCATAAA
GTTGTAGATC GCAAGTCTAA ACCAACATTG GATGAAATGC TCATTGTTTT GAAGCAGGAA
CCTTTTTATA AAGGTCAGAT CGAACAGGTT TGTACCTTGA CTCCTGCTCA GAAAGCTATG
AAGGTGCCTT TAGGGGACTT CGAAGGCCAT ATATATAATA TTCATCCGGA ACTAAGAGAT
GCTCTATACA ATTATAAAGG AATTGATATA TACAAGGACT TGTATTCCCA TCAAGCTGAT
GCCTTAAAAA CACTCTTACA ACCCAATAGT TTTGGAAGAC ATGTTATTGT GAGTACTGCC
ACAGCTTCAG GGAAGTCGCT CATCTATCAG ATCCCAGTAT TGAATGAAAT TTTGTGGGAT
ATTACTAATG GTAAGAAATC CAGATCGACA ACTGCATTCT TCATATTTCC GACCAAAGCA
TTAGCTCAGG ATCAAAAACG ACATTTGGAA GAATTTATAC TGTACCTACC CACCAATGAA
AAGAGAAAAA TTATAGTACA AACATATGAT GGAGATACGG CAAGCCGAGA TAGAAACTTT
GTTAGATCTT TTGCTGATAT TGTATTTACC AACCCAGATA CAATTCATGC ATCTGTATTA
CCTAATCACC TAGGGTATTC TGATTCCTCT GGGTGGATTC CGTTCCTTCG TAGTCTCAAG
TTCATTGTAG TCGATGAATT GCATGTGTAT AAGGGTACCT TTGGTATTCA AGTAAGTTAT
GTGATGACTA GACTTCTAAG AATTACCGAG AAACTCAAAA ATGGGGTCAA TGACATTACC
TTTGTTTCAT GTTCAGCAAC AATTTCCAAT CCTGTGGCTC ATTTCAGAGC AGTTTGTGCT
ATACCAAAGT GTGATCAAGT AGTTCATGTT GCCAACGACG GCAGCCCATG CTCTGAGAGG
AAGTTGGTAG TGTGGAATCC ACCAGCTTTG ATGAATAAGA AGGGTCAGAT TCAGTCTACA
TTAAAGTCTT CAATGACGAT AGAGTCTACT GTAAGTAACA CTCTAATTCC AAGAGTGGGA
ATAGTTGCTG AACTGGCTCG ATTGTTGGTT CATCTCCTTT CAAATTTGTC CGAAATTAAA
GTGATTGTAT TCTGCCCTAT TAGAGTTGTG TGCGAATTGC TTATGAACGA AGTAAGACAT
CTTTTAAGAT CCTCGGACCA TACAGAGAGA GCACTTTTGA ATGAACATGA TATCATGTCT
TATCGAGGAG GTTATTCAAA GGAAGATAGA AGAGTCATTG AGCAGAAGAT GTTTACCGGA
CAACTTAGAG CTATTGTAGC CACTAATGCT TTGGAGTTGG GAATAGATTT ATCGGATCTA
GATATTGTAA TTACATGTGG CTTCCCCATT CTGAAGCTGC ATATGCATCA ACAATTTGGA
AGAGCTGGTA GAGCAAGAGA TTCCAAGGGA AGTTTGGCAA TATTTGTAGC GGGTCCCACT
CCTATTGACC AGTATTACCT AAGCAATTAT AAGGATATTC TTGACAAGAA CTCCTATGAA
GACCTTTGCG TCGATGGACT CTTGGATTTA GGTTCATACC ATTTGACATT AGAACAGCAC
ATGCAATGTG CTGCATTTGA GGACCCACTT GATATTGTAG AGGATTTGAA GTGGTTTGCT
CCAGATGGTT CAACAGGTAA GGCGAATGCG TTTGTTAAAA TCTGTCAGGA GAGACTCCTC
AAGGATAATA CTGGCAAATA CAGGACTTCG CCTAACTTCT TGCCTTGGCC CAGCGATCTT
GTTACCATTA GAGCTATAGA AGAGTCTTCC TTTGCTGTTG TAGATATCAC TAATGGACGT
AATATCGTTA TTGAAGAAGT GGAATCTCTG AGAACCAATT TCACTCTCTA CGAAGGTGGC
ATTTTTCTTC ACCAAGGATT CCCCTACTTA GTCAGAGAAT TCAATGCGGA CCAAAAGTTT
GCTAAGGTGG AAAGAGTGAA TGTCGATTGG ACAACTCTGC AGAGAGATTT TACGGACATG
GACCCCATGG AAGCACAATA TGTAAAGCAG CTCTATCCAC CCAATCTGGC TGTCCCGTCT
GATATACCCG TATTTCTTGG TTTGGTGAAA ACCACCATAA AAGTGTTTGG CTTTTTTAAG
TTGAATAGAA GAAATGAGAT TCTTGAAGCA GTAGACGTCA AAAATTCACC TGTCATTATA
ATTAATAAGG GATTCTGGGT TGATATAGGT AGTGAGGTAA TCGATATCAT CAATAAGAAG
CAATTATCGC CAGCTGCTGG TATTCATGCT GCTCTGCATG CCATAATCAA CATCTTACCT
GTTTTCATCA ATGGTACGGT TGATACTTCT AGCAAAAGCT ACTACTCTGG TGTTGGAGAG
GCCGAATTGG TGACAGAATG CAAAGCACCA GAAAAGGAAT TCGCGAGACG TGAATCTAAC
CGTAAGCGAC CAGCTAGATT GATCTTTAAT GATTCCAAAG GAGGGGAACT AGGCAGTGGC
ATGTCAGCAA AAGCGTTTGA ATATTTTGAT GAGATTTTGC AAACCACTTT TGACAAGGTG
CGTAATTGTG AATGTGAATG GGGCTGTCCA TTGTGTATTG CTCCCAAGTT TTGTAAAGAG
AGACTGATAG TGATGTCTAA ACCAGCGGCT TTGTTAATTT TGGCTTCCTT GTTGGGATAC
GATCTTAATG AATTTCAAGA GCAGGTGCAA GATGGGCCGG AGCAAAATAT GCCTGCTATC
ACCATAGAGA CCATTGAAAG CGGTCCATCT ACTGTGAAAT TTTCAAAGGA TGTGGAAATA
ATCAGTGTAA GAAAAGCTCG ACACCCTTTG AATCCAAAGG TAGAAGTAAA GGAA
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| Protein sequence | MPPKKANINT SKWPPSFQRL YRLFVQINTH LTFLSSHSRT TIPTFELLQK LNPDINTLDL
TLMKGLLPDK HVAYKYVDEN QLMLSMAEKV EYSRSHGYKQ GNASSMDDAF EQVANNHGLS
GSNQLLVFDF QDTRMHGIGG VVKGGRAKRR KVEQNDTNND FFLSSSDLAF SPLTQIQLTR
MINSRSDNFK EILKAYLDGF SEEEVSQDIP MQKLVAKYEP LIPQPPVLND PVEQLEHSHK
VVDRKSKPTL DEMLIVLKQE PFYKGQIEQV CTLTPAQKAM KVPLGDFEGH IYNIHPELRD
ALYNYKGIDI YKDLYSHQAD ALKTLLQPNS FGRHVIVSTA TASGKSLIYQ IPVLNEILWD
ITNGKKSRST TAFFIFPTKA LAQDQKRHLE EFISYLPTNE KRKIIVQTYD GDTASRDRNF
VRSFADIVFT NPDTIHASVL PNHLGYSDSS GWIPFLRSLK FIVVDELHVY KGTFGIQVSY
VMTRLLRITE KLKNGVNDIT FVSCSATISN PVAHFRAVCA IPKCDQVVHV ANDGSPCSER
KLVVWNPPAL MNKKGQIQST LKSSMTIEST VSNTLIPRVG IVAESARLLV HLLSNLSEIK
VIVFCPIRVV CELLMNEVRH LLRSSDHTER ALLNEHDIMS YRGGYSKEDR RVIEQKMFTG
QLRAIVATNA LELGIDLSDL DIVITCGFPI SKSHMHQQFG RAGRARDSKG SLAIFVAGPT
PIDQYYLSNY KDILDKNSYE DLCVDGLLDL GSYHLTLEQH MQCAAFEDPL DIVEDLKWFA
PDGSTGKANA FVKICQERLL KDNTGKYRTS PNFLPWPSDL VTIRAIEESS FAVVDITNGR
NIVIEEVESS RTNFTLYEGG IFLHQGFPYL VREFNADQKF AKVERVNVDW TTSQRDFTDM
DPMEAQYVKQ LYPPNSAVPS DIPVFLGLVK TTIKVFGFFK LNRRNEILEA VDVKNSPVII
INKGFWVDIG SEVIDIINKK QLSPAAGIHA ASHAIINILP VFINGTVDTS SKSYYSGVGE
AELVTECKAP EKEFARRESN RKRPARLIFN DSKGGELGSG MSAKAFEYFD EILQTTFDKV
RNCECEWGCP LCIAPKFCKE RSIVMSKPAA LLILASLLGY DLNEFQEQVQ DGPEQNMPAI
TIETIESGPS TVKFSKDVEI ISVRKARHPL NPKVEVKE
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