| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62095 |
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| Symbol | ARO10 |
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| ID | 4839838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1053281 |
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| End bp | 1055152 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391153 |
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| Product | pyruvate decarboxylase (PDC6) (PDC3) |
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| Protein accession | XP_001385896 |
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| Protein GI | 126138746 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.732507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.466164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTG TGCAAGAAAC AATACGCCTT CCAGGCACTT CTTCTCCTAC GGTTCCTGAA
AACGTCACTT TGGGCGAGTA TCTCTTCCTC AGAATCTCTC AGGCTAATCC AAAGTTGAGG
TCCATCTTTG GTATTCCTGG CGACTTCAAT GTCGATTTGT TGGAACACTT GTACTCTCCA
GTTGTCGCTG GAAGAGACAT AAAGTTTATT GGCTTATGTA ACGAATTGAA TGGTGCCTAC
ACTGCTGATG GATACTCCAG GGCCATTGGA GGTTTGAGCA CTTTTATTTC TACATTCGGT
GTTGGTGAAT TGTCGGCCAT TAACGGAATC GCTGGATCGT TTGCTGAGTT TTCTCCTGTG
CTTCACATTG TAGGCACCAC CTCCTTACCA CAACGTGACC ATGCCATTAA CGGCAGCGAC
GTTAGAAACC ACCACCACTT AATTCAAAAC AAGAATCCTT TGTGTCAGCC AAATCATGAT
GTCTACAAGA AGATGATTGA ACCTATCTCA GTTATTCAGG AATCTTTAGA CAGTGATTTG
CAAAGGAACA TGGAAAAGAT TGATAGAGTT TTGGTTAAGA TTCTCCAGGA ATCTAGACCT
GGATACCTCT TTATCCCTTG TGATATTACC AACTTAATAG TCCCAAGCTA TAGATTATAT
GAAACCCCAT TACCTCTTGA AATCCAATTG ACCACTTCTG GCGTCGAAGT ATTAGAAGAC
GTTGTTGACG CTATTTTGTT CAGATTGTAC AAGAGTAAGA ACCCATCGTT GTTGTCGGAT
TGCTTGACTA CCAGATTCAA TCTTCAAGAC AAGTTGAATA CACTTGTTGC TAAATTACCT
TCCAACTTCG TCAAGTTGTT TTCGACAAAC ATGGCTAGAA ACATAGATGA GTCGCTCAGC
AACTTTGTAG GTCTTTACTT TGGCATTGGT TCTTCAAGCA AGGAAGTGTC CAGACAATTG
GAGAGAAACA CCGATTTCTT GATCAATTTG GGATACTTTA ATGCTGAAAC TACGACTGCT
GGTTATTCCA ATGACTTCTC CAATATCGAG GAGTATATTG AAATCAACCC TGATTACATC
AAGGTCAATG AACACATCAT TAACATTAAA AATCCTGAGT CTGGAAAGAG GTTGTTCTCT
ATGGGCCAGT TGTTGGATGC ATTACTCTTT AAATTAGACC TCAACAAGAT TGAGAACATA
AACAACAATA ATATTAGCTA CAAGTTCTTC CCACCAACTT TATATGAGCA AGACAACAAT
ACCGATTACA TTCCACAAAC AAAACTAGTG GACTATTTGA ATGAGAATTT GCAGCCTGGT
GATCTTTTGG TAATGGACAC CATGTCATTC TGCTTTGCTT TACCTGACAT AATGCTTCCA
CAAGGTGTTC AATTATTAAC CCAGAATTAC TATGGATCCA TTGGCTATGC ATTGCCATCC
ACTTTCGGTG CTACCATGGC AGTCAATGAC CTTGGTAGTG ATAGAAGAAT CATCTTAATT
GAAGGTGATG GGGCAGCCCA GATGACTATC CAGGAATTGT CTTCGTTCCT CAAATACAAG
GAATTTTTGC CAAACATGCC TAAGATCTTC TTGATCAATA ACGATGGTTA CACTGTCGAG
AGAATGATTA AGGGACCAAC CAGATCATAC AATGACATCA ATGGTGAATG GAGTTGGACA
CAATTGCTTG GTGTGTTTGG AGATAAAGAG CAAAAGTACC ACTCTACTGC CTTGTTGCGC
AATGTCAACG AATTCAACAA GTATTTTGAA TTTCAAAGGC AGACTGACAA TTCTAAGTTG
GAGTTCATTG AGTTGATAGC CGGCAAATAC GATTGTCCTC TTAGATTTAG CGAAATGTTT
TGCAAGAAAT AG
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| Protein sequence | MTPVQETIRL PGTSSPTVPE NVTLGEYLFL RISQANPKLR SIFGIPGDFN VDLLEHLYSP
VVAGRDIKFI GLCNELNGAY TADGYSRAIG GLSTFISTFG VGELSAINGI AGSFAEFSPV
LHIVGTTSLP QRDHAINGSD VRNHHHLIQN KNPLCQPNHD VYKKMIEPIS VIQESLDSDL
QRNMEKIDRV LVKILQESRP GYLFIPCDIT NLIVPSYRLY ETPLPLEIQL TTSGVEVLED
VVDAILFRLY KSKNPSLLSD CLTTRFNLQD KLNTLVAKLP SNFVKLFSTN MARNIDESLS
NFVGLYFGIG SSSKEVSRQL ERNTDFLINL GYFNAETTTA GYSNDFSNIE EYIEINPDYI
KVNEHIINIK NPESGKRLFS MGQLLDALLF KLDLNKIENI NNNNISYKFF PPTLYEQDNN
TDYIPQTKLV DYLNENLQPG DLLVMDTMSF CFALPDIMLP QGVQLLTQNY YGSIGYALPS
TFGATMAVND LGSDRRIILI EGDGAAQMTI QELSSFLKYK EFLPNMPKIF LINNDGYTVE
RMIKGPTRSY NDINGEWSWT QLLGVFGDKE QKYHSTALLR NVNEFNKYFE FQRQTDNSKL
EFIELIAGKY DCPLRFSEMF CKK
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