| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61942 |
|---|
| Symbol | ECM33 |
|---|
| ID | 4840287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 700611 |
|---|
| End bp | 701750 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640391602 |
|---|
| Product | 3-prime end of ExtraCellular Mutant protein |
|---|
| Protein accession | XP_001385486 |
|---|
| Protein GI | 126137926 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.307554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCCACCTTGA CTACAGCCAC TCCTTCAGTC GCTAGCGGTT GTTCCTTTTC CAGTTTTGTT
GCCACAGCTT CTGCCCAAGT TCAACAAGTT GCTGCCTGTG CTACTGCTGT CGGTGATATC
ACCATCCGTG GTGACTCTTT CGGTTCTATC GAATTGACCG GTTTGGAACA AGTTTTTGGT
TCCTTGAAGA TCCAAAACAC CACTCTCGCA ACCACAATCA ACGCACCAAC TTTGCAGTTG
ATTTCGGAAG ATTTCGAATT GTCTGGTTTG ACCATCTTGA ACACTTTGAA CCTTGCTCAA
TTGAACACCG TCGGTTCTCT TAACTGGGTC ACTTTGCCAG CCTTGGAAAG CACCGGTTTG
ACTCAAGGTA TCACTGCAGC TGATTCCGTC GTTATCTCGG ACACTGGTTT GACCGCTTTG
ACTGGTATCA ACGTTGTTGA ATTGCAAACT TTCGACGTCA ACAACAACCA AGACATCAAC
ACTATTGACT CTGCTTTGCA ATCCGTCACT AGCCTTTTGT CCATCTCTTA CAACGCTGAA
AGTGTCGATG TCGTTTTGGA CGAATTGACC TCTGCCAAGA ACGTCGTCTT CCAATCTATC
AACTCTTTGT CTGTTGGTAA CTTGACCACC ATCAACGGTT CCTTGTCTGT TTCTCAATCT
TCCATTGATG CCATCGAATT CAAAGACTTA ACCTCTATCA GTAACTCCTT GACCATCAAC
AAGAACTCCG AATTGGAGTC CTTGGACTTC CCTAAGTTGA CTTCTATCGG TGGTGCTTTG
GAAATCTCCG ACAACGACAA GTTGAAGTCA TTCGACGGTT TCCCAGAATT GAAGACCATC
GGTGGTTCCG TTGACATCAA CGGTACCTTC GACAACGGTA CCTTCGAATC CTTGTCCAGA
GTTGCCGGTG GTTTCACCTT GAAGTCGGAC GGTGATATTT CTTGTGAGGA ATTCAACAAG
TTGAACTCTG ACGGAGACAT CAAGGGTAAC AAGTTCTTCT GTGCCAACGC TGCCGGTGCT
TCTTCTTCTT CGTCTTCTTC TAAGAAGGGT TCTTCCACCG ACTCCTCTGA CTCCACTGAA
ACCGCTTCTG AAACTGAAAC CAGCTCCACC AAGGCTTCCG ACGCTTCGGT TCACTCTGGA
|
|---|
| Protein sequence | STLTTATPSV ASGCSFSSFV ATASAQVQQV AACATAVGDI TIRGDSFGSI ELTGLEQVFG
SLKIQNTTLA TTINAPTLQL ISEDFELSGL TILNTLNLAQ LNTVGSLNWV TLPALESTGL
TQGITAADSV VISDTGLTAL TGINVVELQT FDVNNNQDIN TIDSALQSVT SLLSISYNAE
SVDVVLDELT SAKNVVFQSI NSLSVGNLTT INGSLSVSQS SIDAIEFKDL TSISNSLTIN
KNSELESLDF PKLTSIGGAL EISDNDKLKS FDGFPELKTI GGSVDINGTF DNGTFESLSR
VAGGFTLKSD GDISCEEFNK LNSDGDIKGN KFFCANAAGA SSSSSSSKKG SSTDSSDSTE
TASETETSST KASDASVHSG
|
|---|
| |