Gene PICST_61764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61764 
Symbol 
ID4840251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1378049 
End bp1379491 
Gene Length1443 bp 
Protein Length480 aa 
Translation table12 
GC content38% 
IMG OID640391566 
Productpredicted protein 
Protein accessionXP_001385961 
Protein GI150866383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTA TAGGGGGAAT TGCTCCTGCT CCAGAATTTT CAAAGAAATT ATCTTACCCA 
ATTCCACCTG ACCTTGAAGA TTACGAGAAG TTTTCTGAGC TCAAGAGAAA ATTGATCAAG
CCTGAAAATA TAGAAAAAGT GAAGGAGTCT TGGAAAAGAC TATTAGTTGC AATTGAGAAA
AAGGTCGAAG AAATAAAAAA TGCAAAAGAT TCATACATTC CTGAAATTGA ATGGAAAACT
ATCAAGGAGA ATGGTAATAA ATTTCCAGAA GATATTGGAA AGTTGTTTGA AGAAAGAGGA
TGTCTAATAG TTCGCAATGT TCTCGACAAA GATACTGTTC GTGGTTGGTA CCAGCAACTA
TCTGATTTTG TTTCAAAGCA TCCTGATGTA GGTGGATACC CGAACCCGAT TACAAACTGG
TTTGTATTCT GGAATAAGGC TATGATAGAA GCTAGATCAC ATCCTGAAAT CACCCAATTG
ATGAGTGTAA TGTCTCAATT CTTCTATGTA AAAGATAGTA ATTTACCAAT CGACAAGGAT
TCCCAGATAG TTTATCCAGA TGCTTTTAGA ATCAGAAGTC CTGGACAAGA AACAACTTTA
GATTTACATT TGGATTCTGG CTCTATTGAA CGTTGGGAAG ATGAAGGGTA CAGAAGAGTA
TATGCACCAA TTTTCGAAGG CAGATGGGAA GATTTCGAGC CATTCGAATT AGACCTGAGA
TCTTTTGCTA AATCAGATTT ATATTCTCAT TTAAAGACAA GACCAACAGC TACATCGGCA
TTTAGAACTT TGCAAGGTTG GCTAGCATTA ACTTCGGTCA AAAGCGGAGA AGGTACTATT
AGATTTTTAC CTAACATTAA GTTAGTTACT GCTTACCTGA TTCTCAGACC ATTCTTTTGG
AGAGATGATG GTGAAATTGA CATAGAAACT CCTAAGTTTC CTGGAGCAAT TGTTGGTTCT
GGCCAGTTTT TCTTGAGTGA AAAACTCCAC CCCCACCTCA AGCCTTTGGA ATCGGTGATA
AGCATCCCAT ACGCAAATGA GAGTGACTAT ATATTCTGGC ATTGCGACGT TGCCCATGAG
GTTGACAAAG TCCACAATGG AAAGAACATC TCTTCAGTAT TTTACAATGC CTTGTGTCCA
TTAGCTCCAT ACAATGTGGA CAATATGATA GCCACTAGAA GAGCTTTCTA CAGGGCAGAA
TGTCCAAGAG ATTTCATTAA AGATCGTACT CAAAGTGGTC CTTCTGAAGG TGACTTCCCT
GGTGAGCACG GCGATGAAAG AAATATTCTT ACTGATGTTG GTTTGAGGGC TTTAGGTTTA
AAACAGTTTG AGCTCGAAGA GGAAGGGTTG TCCGCTGGTC AAAGAAGAAT TAGAAACTTT
GCCAATAATG CAATGAAAAC TGGTATTTAT AATGAAAAAG AGTTATATAA CTATATGAGA
TGA
 
Protein sequence
MSTIGGIAPA PEFSKKLSYP IPPDLEDYEK FSELKRKLIK PENIEKVKES WKRLLVAIEK 
KVEEIKNAKD SYIPEIEWKT IKENGNKFPE DIGKLFEERG CLIVRNVLDK DTVRGWYQQL
SDFVSKHPDV GGYPNPITNW FVFWNKAMIE ARSHPEITQL MSVMSQFFYV KDSNLPIDKD
SQIVYPDAFR IRSPGQETTL DLHLDSGSIE RWEDEGYRRV YAPIFEGRWE DFEPFELDSR
SFAKSDLYSH LKTRPTATSA FRTLQGWLAL TSVKSGEGTI RFLPNIKLVT AYSILRPFFW
RDDGEIDIET PKFPGAIVGS GQFFLSEKLH PHLKPLESVI SIPYANESDY IFWHCDVAHE
VDKVHNGKNI SSVFYNALCP LAPYNVDNMI ATRRAFYRAE CPRDFIKDRT QSGPSEGDFP
GEHGDERNIL TDVGLRALGL KQFELEEEGL SAGQRRIRNF ANNAMKTGIY NEKELYNYMR