Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_61764 |
Symbol | |
ID | 4840251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1378049 |
End bp | 1379491 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640391566 |
Product | predicted protein |
Protein accession | XP_001385961 |
Protein GI | 150866383 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTACTA TAGGGGGAAT TGCTCCTGCT CCAGAATTTT CAAAGAAATT ATCTTACCCA ATTCCACCTG ACCTTGAAGA TTACGAGAAG TTTTCTGAGC TCAAGAGAAA ATTGATCAAG CCTGAAAATA TAGAAAAAGT GAAGGAGTCT TGGAAAAGAC TATTAGTTGC AATTGAGAAA AAGGTCGAAG AAATAAAAAA TGCAAAAGAT TCATACATTC CTGAAATTGA ATGGAAAACT ATCAAGGAGA ATGGTAATAA ATTTCCAGAA GATATTGGAA AGTTGTTTGA AGAAAGAGGA TGTCTAATAG TTCGCAATGT TCTCGACAAA GATACTGTTC GTGGTTGGTA CCAGCAACTA TCTGATTTTG TTTCAAAGCA TCCTGATGTA GGTGGATACC CGAACCCGAT TACAAACTGG TTTGTATTCT GGAATAAGGC TATGATAGAA GCTAGATCAC ATCCTGAAAT CACCCAATTG ATGAGTGTAA TGTCTCAATT CTTCTATGTA AAAGATAGTA ATTTACCAAT CGACAAGGAT TCCCAGATAG TTTATCCAGA TGCTTTTAGA ATCAGAAGTC CTGGACAAGA AACAACTTTA GATTTACATT TGGATTCTGG CTCTATTGAA CGTTGGGAAG ATGAAGGGTA CAGAAGAGTA TATGCACCAA TTTTCGAAGG CAGATGGGAA GATTTCGAGC CATTCGAATT AGACCTGAGA TCTTTTGCTA AATCAGATTT ATATTCTCAT TTAAAGACAA GACCAACAGC TACATCGGCA TTTAGAACTT TGCAAGGTTG GCTAGCATTA ACTTCGGTCA AAAGCGGAGA AGGTACTATT AGATTTTTAC CTAACATTAA GTTAGTTACT GCTTACCTGA TTCTCAGACC ATTCTTTTGG AGAGATGATG GTGAAATTGA CATAGAAACT CCTAAGTTTC CTGGAGCAAT TGTTGGTTCT GGCCAGTTTT TCTTGAGTGA AAAACTCCAC CCCCACCTCA AGCCTTTGGA ATCGGTGATA AGCATCCCAT ACGCAAATGA GAGTGACTAT ATATTCTGGC ATTGCGACGT TGCCCATGAG GTTGACAAAG TCCACAATGG AAAGAACATC TCTTCAGTAT TTTACAATGC CTTGTGTCCA TTAGCTCCAT ACAATGTGGA CAATATGATA GCCACTAGAA GAGCTTTCTA CAGGGCAGAA TGTCCAAGAG ATTTCATTAA AGATCGTACT CAAAGTGGTC CTTCTGAAGG TGACTTCCCT GGTGAGCACG GCGATGAAAG AAATATTCTT ACTGATGTTG GTTTGAGGGC TTTAGGTTTA AAACAGTTTG AGCTCGAAGA GGAAGGGTTG TCCGCTGGTC AAAGAAGAAT TAGAAACTTT GCCAATAATG CAATGAAAAC TGGTATTTAT AATGAAAAAG AGTTATATAA CTATATGAGA TGA
|
Protein sequence | MSTIGGIAPA PEFSKKLSYP IPPDLEDYEK FSELKRKLIK PENIEKVKES WKRLLVAIEK KVEEIKNAKD SYIPEIEWKT IKENGNKFPE DIGKLFEERG CLIVRNVLDK DTVRGWYQQL SDFVSKHPDV GGYPNPITNW FVFWNKAMIE ARSHPEITQL MSVMSQFFYV KDSNLPIDKD SQIVYPDAFR IRSPGQETTL DLHLDSGSIE RWEDEGYRRV YAPIFEGRWE DFEPFELDSR SFAKSDLYSH LKTRPTATSA FRTLQGWLAL TSVKSGEGTI RFLPNIKLVT AYSILRPFFW RDDGEIDIET PKFPGAIVGS GQFFLSEKLH PHLKPLESVI SIPYANESDY IFWHCDVAHE VDKVHNGKNI SSVFYNALCP LAPYNVDNMI ATRRAFYRAE CPRDFIKDRT QSGPSEGDFP GEHGDERNIL TDVGLRALGL KQFELEEEGL SAGQRRIRNF ANNAMKTGIY NEKELYNYMR
|
| |