| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61642 |
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| Symbol | STM1 |
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| ID | 4840269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1465419 |
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| End bp | 1466441 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391584 |
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| Product | Stomatin-like protein 3 |
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| Protein accession | XP_001385979 |
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| Protein GI | 126138912 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTT CCGTCACTTC TTTTGAGCCA GACTCGTACA AACAGACCAT TAAGTCCCAG
CCGGCTATTA AGCCTGAAAT GGTGCTTAAA AACTTTGCCC GTTCCTACGA CACTCCACCA
TTCAATAGCT ACCAAAGGTT TATTTCCTCT ATGGGAACGC TTTTTGGTTC CTGTGGTATT
TTCTGTTTCG TGTGCTCGAA CCCATATAAG GAAGTCCAGC AGGGTGAGGT CGGTTTGGTT
CAGACTTTTG GTGCTTTGTC GAGAACTGTT GAGCCAGGTT TGTCTTATGT CAATACTTGG
TCCGAGAAGT TAACCAGAGT TTCCATCAAG ATTAATATCC GTGAAATTCC TGCCCAAAAG
TGTTTCACTA GGGACAATGT CTCGGTAATT ATTACCTCTG TTGTCTACTA CAATATTATT
GATCCACAAA AGGCCATCTA CTCCATTGCC AATATCCACG ATGCTATTGT TGAAAGAACT
CAAACCACAC TTAGAGACGT CATTGGTGGA AGAACTTTGC AGGAAGTTGT TGAAAAGAGA
GAGGAAATCG CCGAGTCTAT CGAGCACGTA ATCGCCAAAA CTGCTTTCGA CTGGGGTGTG
AATATTGAAT CGATCTTGAT CAAGGACTTG ACTTTGCCGG ACAAGGTCCA GAGCTCGCTT
TCTATGGCCG CAGAAGCTAA GAGAATCGGT GAAGGTAAGA TTATCAACGC TAAGGCTGAA
GTTGAAAGTG CCAAGTTGAT GAGAAAGGCA GCCGATATCT TGGCTTCAAA GCCTGCTATG
CAAATCAGAT ATTTGGACGC TTTGCAGAAC ATGGCCAAAT CACCTGGTAC CAGAGTTATC
TTTATGCCTT CATCTCAGGA AGTTGAAAGA TTAGCCTCCT CCAACGTCGA CTACGCCCCA
AGCAATGGAA AGGAAAAGCA CGCTGACTTA GATGAAGATA GCGAATGGGC TGGTAATGAC
AACAGCAACA AGCGTATGAT CGAAACTGTG GCTTTGCAAG AAGCCATGCA CACGGGACAC
TGA
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| Protein sequence | MSASVTSFEP DSYKQTIKSQ PAIKPEMVLK NFARSYDTPP FNSYQRFISS MGTLFGSCGI
FCFVCSNPYK EVQQGEVGLV QTFGALSRTV EPGLSYVNTW SEKLTRVSIK INIREIPAQK
CFTRDNVSVI ITSVVYYNII DPQKAIYSIA NIHDAIVERT QTTLRDVIGG RTLQEVVEKR
EEIAESIEHV IAKTAFDWGV NIESILIKDL TLPDKVQSSL SMAAEAKRIG EGKIINAKAE
VESAKLMRKA ADILASKPAM QIRYLDALQN MAKSPGTRVI FMPSSQEVER LASSNVDYAP
SNGKEKHADL DEDSEWAGND NSNKRMIETV ALQEAMHTGH
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