| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61589 |
|---|
| Symbol | |
|---|
| ID | 4839742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 74021 |
|---|
| End bp | 74668 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640391057 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001385348 |
|---|
| Protein GI | 126137650 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.393606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG ACATCCCAGA TCCGTTTGTA CCGCCTTTGA GGTTCAACAC CGTGCAGAAA
AACTTGTATC GTGGTGCATA TCCGCGAGAA ATTAATCTTA CCTTTCTCAA AACCTTACAA
TTAAAGGTCA TAATATCATT AACTCCTAAC CCAATAACGA AAGAAACAGA TCCTATACTA
TACGAATTTG CCACAGCTAA CAACATTGGC TTGATCCATG TAGAATGTGC TCAATCAGGG
AAGGGGAAAA AGAGAGGAGT GCCAATGGGG TACACTACAG TTTTACAAGC TCTCAACTTC
ATGATTCACA ACGAATTCGC TCCAGTATAT ATCCATTGTC TCAATGGTGG GCAGGTAACA
AGTTTGGTGA TAGCCTGTTT ACGTAAATTA CAATTCTGGT CATCAATTTC AATCTTCAAT
GAATTTATTA ATTTCACAGC CAACATCACA GTTAACGATA GAAGCTTTGT AGAGGGATTC
AAAGGGGAAC TCAACATTAA TTCGGAGGAT AAAGTTGATT GGCTTTGGGT AGGAATGAGC
AAAGGTGTAG TTGGAAGCCA TCCCAGAATA CGAGTTAATG AGACTACGAG TTCTACTACA
AGCAGTTCTC CAGTACAGGA ATCGAAAATG CAGTTGATGG ATTGCTAA
|
|---|
| Protein sequence | MSYDIPDPFV PPLRFNTVQK NLYRGAYPRE INLTFLKTLQ LKVIISLTPN PITKETDPIL
YEFATANNIG LIHVECAQSG KGKKRGVPMG YTTVLQALNF MIHNEFAPVY IHCLNGGQVT
SLVIACLRKL QFWSSISIFN EFINFTANIT VNDRSFVEGF KGELNINSED KVDWLWVGMS
KGVVGSHPRI RVNETTSSTT SSSPVQESKM QLMDC
|
|---|
| |