| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61578 |
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| Symbol | TRK1 |
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| ID | 4839844 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1077577 |
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| End bp | 1080984 |
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| Gene Length | 3408 bp |
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| Protein Length | 1024 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391159 |
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| Product | low affinity potassium transporter |
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| Protein accession | XP_001385561 |
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| Protein GI | 150866084 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00934] potassium uptake protein, Trk family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0609967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA CAATAAAGAA ATACTATGCT ACATATCGAC GGAAGAGGTT GGAGTCTGAA
GTAGGGCTTC GAGTACGGAA CCAGATCCAC AGGTTGTCTC TGGTCTTAGG GCCCACTGTC
AAGGTGTTAG TGCCGAATTT CCGGGCTGCC CATTATTGCT ATATCATTTT CTGGGTCTTT
TTCGGGTCTG TGCTAGTATA TCCTGTCAGA AATTTGAGAT ATATCGACGC TCTCTTCTTC
ACTGGGGGTG CGTCCACACA GGCTGGATTA AACACTGTGG ATACCAACAC TATTGCTTTG
TACCAGCAGA TTATTCTCTA CATCATTGCT ACATTTACGA CACCCATTTT CATCCATGGG
CTGATGCTTT TTGTGCGATT GTACTTTTTC GAACGACATT TTGATAACAT CAAGGAGAAG
TCTAAGCTCA ACTTCAAGAT GAGACGGCAG GCTACAATTG CTGCTCGGAC CCAGTCGATG
GACGCTACCA GGTTGAACAC CTTCACCAAC CAAAACTTGG GGTTTGACAA AAGCAAACGC
AACAACAATA GAGGTGACAA TGTAGATAAA GAGCAAAAGG ACAACGGGCT CCATACTGTA
GATGTCGAAA TGGCGAATAA TTCATCACCG CAATCTTCTT CGTCTGTGCC CAAACTGATA
GACGCCAGTA CTTTTCATGG AGATGTAGAA CACATCGATG AGCCCTCCGA TTCTGATGAA
GAAAGAGGAA GGAGAGCCCC CGACGATATC CGATTGAATG ACTTGAATCC GGATTCGCCT
CACGATGCCG TTCGTTTTGG CAACTTGCCA CAGCCATCAA AGAGAGCCAG ATCGAAGGAG
TTAGATCCTT CAGACATGTA CCGGTCTATT GCGCTTTTGC AGGATAGCCA CAATAATAGC
ACCCGTAATC TTGATGGTGG AAGAAGTGGT AACATCCATT TTGATCAGAA TGCTTTACCA
GTAGGCAACT CCAGTTCACA TAATAATGTA GATGATGATG AGGTTTTGGT GATAAAGTCG
CCGAACGAGA TCGAAAAAAC AGGTGGACGT ATTTACACCA AACGCAAACC TAAAAGCCAC
AGACCAAGTG GCAGCTCCGG GTCCAAACCT TGGAAAAAGG GCAGCAAGTG GTCCAATCGT
TTGAGAAAGA CGTTTTCCAA TTCTGGCCTG TCAAGCACAC CCAAAACCAA ACGAAGCTAT
TCCACTGCGC TGGAAGAAAT TGTGGACGAT GATGCTTCTA TTGACTCTGA AAATGAAGTA
GTCACTACTG ACGTTGCAGA TGATGACGAT GAAAATGACC ATGACTACAA CCACAATGAC
AACAACGATG ATGATGACGA TGATGAAGAA GCTGTAGATG ATGAAGATAG CGTAAATGAC
GGAGACGTAG AAGACGATGC CAATCCGGAA AGTCCTAGAA AAGAAGGACC TACCACTCAT
TTTGCGGAGC CTGCCAACGA TCCCCGTAGA AAAAGACCCA ATTTACTAGA TGTTCCTAAT
GGATCGAGAA AGCACTCATT TGTAAGTTCG CCCACTTACG AAAAGTTTGA GAAGTTCAAA
AAGAACATCA AAAAAGGCAA ACTCAAACGG ATAAAAACGC CTGGAGTCTC ACAGACTTCG
TCTCGTTTGT TCGGCTACAA CTCTAGTATC AATGTAGACG ATGATAGTTA CGTGGATGAG
GACGCATATG ACGAAGACGA CGAGGAAGCC AGCTATGAAG AAAACGAAAT CGGCCCTACT
ATCACCAAAG TCATGAGTAC GAACTACTTG TCTTGGGAAC CTACTGTGGG AAGAAACTCT
ACTTTCATTC ATATGACGGA AGCTCAGAAA GAGGAGCTTG GCGGTGTAGA ATACCGTGCG
GTGAAGCTCT TGATCAAGAT TTTGGTACTA TACTATATAG GCTTCCATGT TCTTGCAGTC
GTCCTTCTTC TTCCCTGGAT TCTTATGAGA GAGAGCTACA TAGAAGTAGT TCGTACTCAG
GGTGTCTCTC CTACCTGGTG GGCGTTCTTC ACTGCACTGT CAGCGTTTAA TGATTTGGGA
TTTACCTTAA CAGCAGACTC GATGGTGCTG TTTGGTCGTT CCGTGTATGT GATGATTGTT
GTTTCTTTCT TTATCGTCAT TGGTAATACG GGTTTTCCTG TATTTCTTCG TTTCATAATA
TGGATCTTGT TCAAGACTGC CAAACCATTG TCGTTGTACA AGGAGTCGTT GGGCTTCTTG
TTGGATCACC CCAGACGTTG TTTCACTTTG CTCTTCCCAT CAGTGCCTAC GTGGTGGCTT
TTTATAATTC TTGTGGTTCT CAACGGTGTT GATTTGGTTC TCTTTATCAT TTTGGACTTG
AACAACAACT ATCTTAAGGA GATCCCGGTT GGATACCGTA TTGTTGATGG GCTTTTCCAG
GCTTTCAGTA CCAGAACTGC AGGTTTTGCT GTCGTAGACT TGTCTCAGTT GCACCCTGCC
GTTCAAGTTA GTTACATGAT CATGATGTAT ATCTCTGTTT TGCCTTTGGC TATATCTATC
AGAAGAACTA ACGTTTATGA AGAACAATCT TTGGGTGTTT ACTTGAAAGA AGAGAATCAC
GAAGACGACG AAAAGACTCC ACATACATTT ATAGGTGCGC ATTTGCGAAA CCAATTGTCT
TTCGACTTGT GGTTCATCTT TTTGGGACTC TTTATTATGT GTATAGCCGA GGGGGGCAAA
TTGAACAATA ATGATATCAG ATTCACAGTT TTTTCGATCT TGTTTGAGAT CATCAGTGCC
TATGGTACAG TTGGTTTGTC GCTTGGGTAT ACTGGAGTGA ATGCTTCACT CTCTTCGCAG
TTCTCTGTCA TTTCCAAATT GGTCATCGTA GCCATGATGG TTAGAGGAAG ACATAGAGGT
TTGCCATATA CATTGGATAG AGCCATCATG TTGCCAGATG CTGATATGCA GAGACGTGAT
CACTTGCAAG AAAATCATGC CATCCGTAGA CATACTACAA TGGAAAGAGA AAACACACTT
GGTAGAACAA GCACCTTTGA CGTAGGTGGA GGAATTGGTG GAGACAATAT CTTGAGAAGA
GTGATCACCA GAGAAGGAGG AATTCTTTTC GGTAGAAGAA GATCTTCAGC CTTTGCCATG
CCTTCTCGTT CAAGAACAAA TGCTTCTATC CATAGCACCA ACAGCAGAAC TCATCATCAG
GAACAGGCTT CGCACAATCA GCGCAGACCA CATAATGAAC ATTTTACAAG TCAACAGCTT
CGTACAGACG ACGAAAATGT GACACATGAT TACCACGCTA CGCATACTCA TAAACCTTAT
CCATCCCAGG ATGCCAACCA GCCCATAGTT AGTGAAAATC CTCTGTATAT CATCACTTCA
ACTTCTCAGG AAGAACAGGA GTTAGAGGCA ATCAGAAACC AAGTCTAG
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| Protein sequence | MLDTIKKYYA TYRRKRLESE VGLRVRNQIH RLSSVLGPTV KVLVPNFRAA HYCYIIFWVF
FGSVLVYPVR NLRYIDALFF TGGASTQAGL NTVDTNTIAL YQQIILYIIA TFTTPIFIHG
SMLFVRLYFF ERHFDNIKEK SKLNFKMRRQ ATIAARTQSM DATRLNTFTN QNLGFDKSKR
NNNRGDNVDK EQKDNGLHTV DVEMANNSSP QSSSTFHGDV EHIDEPSDSD EERGRRAPDD
IRLNDLNPDS PHDAVRFGNL PQPSKRARSK ELDPSDMYRS IALLQDSHNN STRNLDDDDE
VLVIKSPNEI EKTGGRIYTK RKPKSHRPSG SSGSKPWKKG SKWSNRLRKT FSNSGSSSTP
KTKRSYSTAS EEIVDDDASI DSENEVVTTD VADDDDENDH DYNHNDNNDD DDDDEEAVDD
EDSVNDGDVE DDANPESPRK EGPTTHFAEP ANDPRRKRPN LLDVPNGSRK HSFVSSPTYE
KFEKFKKNIK KGKLKRIKTP GVSQTSSRLF GYNSSINVDD DSYVDEDAYD EDDEEASYEE
NEIGPTITKV MSTNYLSWEP TVGRNSTFIH MTEAQKEELG GVEYRAVKLL IKILVLYYIG
FHVLAVVLLL PWILMRESYI EVVRTQGVSP TWWAFFTASS AFNDLGFTLT ADSMVSFGRS
VYVMIVVSFF IVIGNTGFPV FLRFIIWILF KTAKPLSLYK ESLGFLLDHP RRCFTLLFPS
VPTWWLFIIL VVLNGVDLVL FIILDLNNNY LKEIPVGYRI VDGLFQAFST RTAGFAVVDL
SQLHPAVQVS YMIMMYISVL PLAISIRRTN VYEEQSLGVY LKEENHEDDE KTPHTFIGAH
LRNQLSFDLW FIFLGLFIMC IAEGGKLNNN DIRFTVFSIL FEIISAYGTV GLSLGYTGVN
ASLSSQFSVI SKLVIVAMMV RGRHRGLPYT LDRAIMLPDA DMQRRDHLQE NHAIRRHTTM
ERENTLGIGG DNILRRVITR EGGILFGRRR SSAFAMPSLS ENPSYIITST SQEEQELEAI
RNQV
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