| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61490 |
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| Symbol | RIB6 |
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| ID | 4840104 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 140595 |
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| End bp | 141896 |
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| Gene Length | 1302 bp |
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| Protein Length | 425 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391419 |
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| Product | DRAP deaminase and pseudouridylate synthase |
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| Protein accession | XP_001385357 |
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| Protein GI | 150865938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTGT CCGTATATGT GTTTGAGAAT GGATTGCGTA AGGTAAGGCC TTACTACCTT
CAATTTAACA CACATCCCAA ACCAAGATGG ATTGGTAGAA CTGTAGTGGA TGTGTTTAGT
TCAGAATTTG GAGAAGCAAA AGATATCCTA AGACTTGATA TCGATAATGA GTTGATGTAC
ATACGAACCG GTTTCGGGAG AAAGGGAGGA GAGACAGTAT TGAAAGGATG GGATTCTATT
GGAGATCGAA TATTGGACAA ATTCGATGTT ATCTGTAATC TGAAACATAT GCATGAACCA
AGTGTTCCTG AATGTCCTCT CCAACTTCAC GAAGATGTAG ATTACCCCAG TCAGGCTAAG
ACAAGATTAA AAATTGTGTT TGAGAATGAA GACATGTTGG TTGTAGATAA GCCATCTGGA
ATTCCCACCC ATCCAACAGG GAACTATTAC TATAACACAA TGACAGAAAT ACTAAAGCAT
GATTTGAATA TGAAGAATGT ATGGCCCTTC CACAGACTCG ATAAGGTTAC GTCTGGGATA
TTGATCTTCG GAAAGTCCAA AACAGCTTGT GACACATATC TGTCAATATT TCAGAACGAG
AAGGATAATA TCAGCAAACA ATATCTCGCA AGAATAGAAG GAGAATTCCC CACCACCGAA
GTCATGGTTA ATTGTCCTAT TTTCTCTGTC AATTCAACTG GTGGATATAT AAAACCATTG
AATGCTGACA TGCTCCCTAT TAATTCTACG ACTGTCTTCA AAAGACTCAG ATATTCTAAG
GAATTGAATC AGAGTATAGT AATTTGTAGG CCGTTGACAG GACGCATGCA CCAGATCAGA
ATACATTTAC GAAACATTGG ACACCCTATA GTTAATGATT ATTTATACAA CCCTACAAAT
GACGAACTTC ATAACCAAGA AATCAACAAG ATTAATGGCT CCATAGAAGT GGAGATATAT
AACAGACTAT TTGAAAAGTA CCCTTCGTTT GGCAAAGTTC AACCTGTTGA TGTTACAATA
GCCAAAACGG ACGAATGCAT CGATCTTTTT GAGATTGCAT CAATCAAGGA TGACAATAGA
CTTCAAAGTA AACTCCAAGA GCTTCAAAAA CTTAGACAGG AAAGTTTAGC CCGACTCAAG
TCCAAGAATA ACACAACTTG CACAGAGTGC AATCGTCAAC TATTTGATAC AAATAAGGAT
ATGACTGATC TGCAAATTTG GTTACATGCT TATAAATACC AATACATAGG TGATCTTAAA
TTTTCGTTTC AGACGGAAGA ACCTTCCTGG TGCTCTATAT AG
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| Protein sequence | MQSSVYVFEN GLRKVRPYYL QFNTHPKPRW IGRTVVDVFS SEFGEAKDIL RLDIDNELMY
IRTGFGRKGG ETVLKGWDSI GDRILDKFDV ICNSKHMHEP SVPECPLQLH EDTRLKIVFE
NEDMLVVDKP SGIPTHPTGN YYYNTMTEIL KHDLNMKNVW PFHRLDKVTS GILIFGKSKT
ACDTYSSIFQ NEKDNISKQY LARIEGEFPT TEVMVNCPIF SVNSTGGYIK PLNADMLPIN
STTVFKRLRY SKELNQSIVI CRPLTGRMHQ IRIHLRNIGH PIVNDYLYNP TNDELHNQEI
NKINGSIEVE IYNRLFEKYP SFGKVQPVDV TIAKTDECID LFEIASIKDD NRLQSKLQEL
QKLRQESLAR LKSKNNTTCT ECNRQLFDTN KDMTDSQIWL HAYKYQYIGD LKFSFQTEEP
SWCSI
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