| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61460 |
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| Symbol | |
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| ID | 4840074 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 340508 |
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| End bp | 342019 |
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| Gene Length | 1512 bp |
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| Protein Length | 496 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391389 |
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| Product | predicted protein |
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| Protein accession | XP_001385753 |
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| Protein GI | 150866230 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5574] RING-finger-containing E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0156696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG CCAAAGTTCT CGAACAGACC TTGATAGAGG ATGACATACC CGAAGAATGG
ATGGAGGCAG CCATTCAATA CAAAGCTCTA AAAAAGTGCA TCAACAAGGT AGTCAACGAA
CTCAAGTTCT TGGGCCTTGA AAAAAATACC CTCAAGTTGC TCTTCCAAGA TGCTGACAGT
AAAATCGTTG AACTCGACGA AAATGATACA ACTGCCTCAA ACCCAATAGT CGCTGAATAT
ACCTTGACCA AGTCCAAAGA CAACAGTCAC GACATTAAGC CGATGCTAAA GATCACCTTG
GACTATTCAA ACGACCAATA CACAGATGAT CATATCTATG AGTTGGGCCA GCAATTGAAG
AAACGAATAG AATCTTTGCT TAATGACGAT GCACCTCTCC AGCACTTGAA ACCACCTCCA
CTAGAATCAT TTAAAGCTGA TACACCAGAA GTGGATTCAT CAGAAGATCT GGATACCGAA
AAAATCATTG AATTGAAAGA AGAAAATGAT GAGATCATTG TGATATCACC AGCGCACAGT
CGTGAAGGTT CACCACCAGC AGTTGCAAAA TCAATCAGTG AAAAATCAGA AGCAACAAAT
ATAGATTCTG CATTGTCTGA GTCTACACCA CCAGCAACAC ATAACAGGAA GAAAAATGAA
ATTTACATCA TGTTAAACTC AGACTCAAAA TTCTTCCAAA TGCTAGAAGG TGAACTTGAA
AACCTCGATA AATTAAAAAC GGCAGAGGAA AAGAAACTTA TCGATGAGGT TCAAGAATTA
GGAGGAATAG TAGCTACATT GTCAAATAAT GCTTCTAGAT GGAAGAATTC TGATATGTAC
ACATGGAGAG AACTTTTTAG AATTTATTTG GATTCCGAGG TGTTTTTCAA GTATAATGAG
ACCTCCTTGC TTTCATCACA AAGGAACAGC GAACAAATCA AGAAGAATCT TGCACAATTT
CTAGATAACG TTGAGAAATC AGGAATTCTA CAGAAATTCA AAAACCTGAA GAGCTTGGAT
GCTTTCAATC AATTTGTGAG CATGAATTAT CATCTTTTGA AAATCTTGCA ATTTCAATCC
ATAAATACAG AAGCATTCAG AAAGATCTTG AAAAAATTCG ACAAACAAAC TTCACTTGGT
ATTCTGCACA AGTTTCCGGA ATTAGTTTCC AATGACCACA TTTTTATTAC AGGAACCTCT
ATAGCTCAAT CCATTTGTTA CATTCTCCAA AATAGAGTCC TCACTTTGAT TCCACAACTA
GAGGACTACA CTTGCCCAAT TTGTATGTCA ATCGCTTACA AGCCGATCAG GTTGCAATGT
GGACACTTGT TTTGTGTGAG GTGTTTGGTC AAGTTGAAGC AACAAAATAA GATTAACTGT
CCAATTTGCA GAAACGAGAA CGCAATACTT ATTGCAGACG GGTCTAATTT GGATATGGAT
GCAATGAATG TAATGGAAAA ATATTTCCCC GTTGAAGTCA AGGAGAAATT AAGAGATAGG
AAGAAAGAGC AG
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| Protein sequence | MKFAKVLEQT LIEDDIPEEW MEAAIQYKAL KKCINKVVNE LKFLGLEKNT LNKIVELDEN
DTTASNPIVA EYTLTKSKDN SHDIKPMLKI TLDYSNDQYT DDHIYELGQQ LKKRIESLLN
DDAPLQHLKP PPLESFKADT PEVDSSEDSD TEKIIELKEE NDEIIVISPA HSREGSPPAV
AKSISEKSEA TNIDSALSES TPPATHNRKK NEIYIMLNSD SKFFQMLEGE LENLDKLKTA
EEKKLIDEVQ ELGGIVATLS NNASRWKNSD MYTWRELFRI YLDSEVFFKY NETSLLSSQR
NSEQIKKNLA QFLDNVEKSG ILQKFKNSKS LDAFNQFVSM NYHLLKILQF QSINTEAFRK
ILKKFDKQTS LGISHKFPEL VSNDHIFITG TSIAQSICYI LQNRVLTLIP QLEDYTCPIC
MSIAYKPIRL QCGHLFCVRC LVKLKQQNKI NCPICRNENA ILIADGSNLD MDAMNVMEKY
FPVEVKEKLR DRKKEQ
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