| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61453 |
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| Symbol | USP39 |
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| ID | 4839739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 59777 |
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| End bp | 61246 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391054 |
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| Product | ubiquitin specific protease |
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| Protein accession | XP_001385345 |
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| Protein GI | 150865930 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.981787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.483859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGGAA ACGATTCTAC TCCTTTGCTA AAGAAACAAA AAGTAGCAGC TCATGAAGAT
TCACAAAGTG ATGCCGAATT CGATTTTCCA GAATATATGA CAAGCAATGT CAACCATTCG
GCACAACAAG ATACTCTTTA CCTAGATACC ATCCACAGGC CTCTATTGGA CTTTGATTTC
GAGAAAGTAT GCCTGGTGAC TCTTTCCAAC ACCAATGTTT ATTGCTGTTT GGTTTGCGGA
AAGTATTTCC TGGGAAGAAG CAGAACTTCT CCATCGTACA CCCATTCGCT CGAGAACAAT
CATCATGTCT TCATAAATCT TCACAACGAA AAGTACTATG TTCTTCCAGA AAACTATGAA
ATTACATCAT ATTCGGCCCT AAAATCGCTA AGAGATATCA ACAACTTCTT GAATCCCAAA
TACACCAAAT CAGACATTGA AAATCTTCCT GTTACTGCTC GAGATCTCGA TCATAAATCC
TACGATGTGG GCTATGTAGG ACTAAACAAT ATATCAGCCA ATGACTATTC CAATGTCGTT
ATACAAGCTC TCAGTCATAT AGTTCCAATA AGGAATTGGT ACTTGAGTTT ATCTCATCGA
CAGGACTTAA ACGCAAGATT GGAATCCATG TCTCCGTTGA ATTACAATTT TGGAATATTG
GTAAGAAAGC TTTGGTCCAA GTACTTGTAC AGAAACCATG TATCTCCACA CGAATTTTTA
CAGTACTTGT CGAGCACCAC AAAGAACCAA TTTCTGATAA CTCGGCAATC GACTCCCAAG
AAGTTGTTGG TGTGGTTATT GAATAATTTG CATCTTCAGC TAAGCAAGCT GATCAAGAAG
TCACTGACTG TACTCAGTGA CAATCTTCGA GGTCGGATAA AAGTCACTTC AATGGAAGTT
CATACCAAAG AAGTTAACGA TAAAGTTGAG TTCGAGACCG ATGAAAATTC TGCAAAGGAG
CTGGTACTGT CTTTTTGGGT TTTAACTCTC GATTTGATAT CATCACCGTT GTTCATGGAT
GTTACTAAAA TACAGGAAGT AGCATTAACC AAGTTATTGC AGAAGTATGA TGGTAAACAA
ACCAGTCAAG TTTCCTCCTC AGAGTTGAGG ACATATAAGC TTATTGCGCC GTTGCCACGA
TACCTCATCT TCCATATAGA CAGAGGACTC GAGAAGGACG GATCCACGAG AGGAAACCCT
ACAGTAGTAC AGTTTTCTAC AACTATCGAT ATGGCTCCGT ATACTGAAGG AGCTGATCAG
TCGCTTAACT ATAAGTTGCT CAGTACTATA AAGCGCCAGC TGACTGAAGG TGTCAAATTG
GATCACAGTG ATGACAAAAA CAATTGGGCT ATAAGTCTTC GTCGTACGGA TGATTCCTGG
GTATGTATTA AGGATTTGGA ATTCAACGCC TGTGAAGGAG GATTGCTTTT CCTAGAAGAG
AACTATTTAC AGATATGGGA AAGATGCTAG
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| Protein sequence | MNGNDSTPLL KKQKVAAHED SQSDAEFDFP EYMTSNVNHS AQQDTLYLDT IHRPLLDFDF
EKVCSVTLSN TNVYCCLVCG KYFSGRSRTS PSYTHSLENN HHVFINLHNE KYYVLPENYE
ITSYSALKSL RDINNFLNPK YTKSDIENLP VTARDLDHKS YDVGYVGLNN ISANDYSNVV
IQALSHIVPI RNWYLSLSHR QDLNARLESM SPLNYNFGIL VRKLWSKYLY RNHVSPHEFL
QYLSSTTKNQ FSITRQSTPK KLLVWLLNNL HLQLSKSIKK SSTVLSDNLR GRIKVTSMEV
HTKEVNDKVE FETDENSAKE SVSSFWVLTL DLISSPLFMD VTKIQEVALT KLLQKYDGKQ
TSQVSSSELR TYKLIAPLPR YLIFHIDRGL EKDGSTRGNP TVVQFSTTID MAPYTEGADQ
SLNYKLLSTI KRQSTEGVKL DHSDDKNNWA ISLRRTDDSW VCIKDLEFNA CEGGLLFLEE
NYLQIWERC
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