Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_61419 |
Symbol | |
ID | 4840045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1004090 |
End bp | 1005073 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640391360 |
Product | predicted protein |
Protein accession | XP_001385548 |
Protein GI | 150866073 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00456855 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCA ACACCATCGA TATTGAAGAT CTCATCCAAA GATTGTTGGA CGCTGGTTAC AGCGGAAAGA GAACAAAGAA TGTATGTTTA AAGAATAACG AAATCCAATT AATCTGTTCT ACAGCAAGAG AAATATTCCT TTCCCAGCCA TCTTTGTTAG AATTGTCGCC TCCTGTTAAG GTGGTTGGTG ACGTTCACGG TCAGTACGGT GACCTTATTA GAATTTTTAC AAAATGTGGG TTTCCACCAT CTACAAACTA TTTATTCTTG GGCGATTACG TTGATAGAGG CAAGCAATCA TTGGAGACAA TACTCTTGTT ATTGTGTTAC AAGATCAAAT ACCCTGAAAA CTTCTTCCTT TTGAGAGGTA ACCATGAATG TGCCAATGTC ACTAGAGTTT ACGGATTCTA TGATGAATGT AAGAGAAGAT GCAATATCAA GACTTGGAAA TTGTTTATTG ATACATTTAA TACTCTACCA ATTGCAGCCA TAGTTGCTGG CAAGATTTTC TGTGTTCATG GAGGATTATC ACCAGTATTG AACTCCATGG ACGAAATCAG AAATATCGCT AGACCCACAG ACGTTCCCGA TTTCGGATTG TTAAATGACT TGCTATGGTC AGATCCAGCT GATACACTAA ACGAATGGGA AGATAACGAA CGAGGGGTAT CATATGTATT TTCGAAGGTA GCTATAAACA AGTTCTTGTC AAAATTCGGA TTTGACTTGG TTTGTCGAGC ACATATGGTG GTCGAAGATG GCTATGAATT TTTCAATGAT AGAACGTTGG TAACTGTATT CCTGGCACCA AATTACTGTG GAGAGTTTGA CAATTGGGGT GCGGTCATGA GTGTTTCGGA AGAGTTGCTT TGCTCCTTCG AGTTGCTTGA TCCATTGGAC AGTGTTGCAT TAAAACAAGT GATGAAGAAA GGAAAGCAAG AAAGAAAATC GGCTCAATTG CAAAGAGTAC TGCTGCAAAG ATGA
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Protein sequence | MSGNTIDIED LIQRLLDAGY SGKRTKNVCL KNNEIQLICS TAREIFLSQP SLLELSPPVK VVGDVHGQYG DLIRIFTKCG FPPSTNYLFL GDYVDRGKQS LETILLLLCY KIKYPENFFL LRGNHECANV TRVYGFYDEC KRRCNIKTWK LFIDTFNTLP IAAIVAGKIF CVHGGLSPVL NSMDEIRNIA RPTDVPDFGL LNDLLWSDPA DTLNEWEDNE RGVSYVFSKV AINKFLSKFG FDLVCRAHMV VEDGYEFFND RTLVTVFSAP NYCGEFDNWG AVMSVSEELL CSFELLDPLD SVALKQVMKK GKQERKSAQL QRVSSQR
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