Gene PICST_61419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61419 
Symbol 
ID4840045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1004090 
End bp1005073 
Gene Length984 bp 
Protein Length327 aa 
Translation table12 
GC content39% 
IMG OID640391360 
Productpredicted protein 
Protein accessionXP_001385548 
Protein GI150866073 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00456855 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA ACACCATCGA TATTGAAGAT CTCATCCAAA GATTGTTGGA CGCTGGTTAC 
AGCGGAAAGA GAACAAAGAA TGTATGTTTA AAGAATAACG AAATCCAATT AATCTGTTCT
ACAGCAAGAG AAATATTCCT TTCCCAGCCA TCTTTGTTAG AATTGTCGCC TCCTGTTAAG
GTGGTTGGTG ACGTTCACGG TCAGTACGGT GACCTTATTA GAATTTTTAC AAAATGTGGG
TTTCCACCAT CTACAAACTA TTTATTCTTG GGCGATTACG TTGATAGAGG CAAGCAATCA
TTGGAGACAA TACTCTTGTT ATTGTGTTAC AAGATCAAAT ACCCTGAAAA CTTCTTCCTT
TTGAGAGGTA ACCATGAATG TGCCAATGTC ACTAGAGTTT ACGGATTCTA TGATGAATGT
AAGAGAAGAT GCAATATCAA GACTTGGAAA TTGTTTATTG ATACATTTAA TACTCTACCA
ATTGCAGCCA TAGTTGCTGG CAAGATTTTC TGTGTTCATG GAGGATTATC ACCAGTATTG
AACTCCATGG ACGAAATCAG AAATATCGCT AGACCCACAG ACGTTCCCGA TTTCGGATTG
TTAAATGACT TGCTATGGTC AGATCCAGCT GATACACTAA ACGAATGGGA AGATAACGAA
CGAGGGGTAT CATATGTATT TTCGAAGGTA GCTATAAACA AGTTCTTGTC AAAATTCGGA
TTTGACTTGG TTTGTCGAGC ACATATGGTG GTCGAAGATG GCTATGAATT TTTCAATGAT
AGAACGTTGG TAACTGTATT CCTGGCACCA AATTACTGTG GAGAGTTTGA CAATTGGGGT
GCGGTCATGA GTGTTTCGGA AGAGTTGCTT TGCTCCTTCG AGTTGCTTGA TCCATTGGAC
AGTGTTGCAT TAAAACAAGT GATGAAGAAA GGAAAGCAAG AAAGAAAATC GGCTCAATTG
CAAAGAGTAC TGCTGCAAAG ATGA
 
Protein sequence
MSGNTIDIED LIQRLLDAGY SGKRTKNVCL KNNEIQLICS TAREIFLSQP SLLELSPPVK 
VVGDVHGQYG DLIRIFTKCG FPPSTNYLFL GDYVDRGKQS LETILLLLCY KIKYPENFFL
LRGNHECANV TRVYGFYDEC KRRCNIKTWK LFIDTFNTLP IAAIVAGKIF CVHGGLSPVL
NSMDEIRNIA RPTDVPDFGL LNDLLWSDPA DTLNEWEDNE RGVSYVFSKV AINKFLSKFG
FDLVCRAHMV VEDGYEFFND RTLVTVFSAP NYCGEFDNWG AVMSVSEELL CSFELLDPLD
SVALKQVMKK GKQERKSAQL QRVSSQR