Gene PICST_61331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61331 
Symbol 
ID4839752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp456808 
End bp457392 
Gene Length585 bp 
Protein Length194 aa 
Translation table12 
GC content43% 
IMG OID640391067 
Productpredicted protein 
Protein accessionXP_001385438 
Protein GI150865993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.972483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAC CTAAACGAAC TAATTCAGGT GCACGCGATG CGTTTACTCT TATAGATATA 
GTTCGCGTGG TAGGTGGTCT ACTTTTTCTC AATGCGTTTT TCTCGTGGTG GTTTACCTCG
ACTTCGACAT GGGGCTATAA TGGAAAATGG ATAAATACGC AATACTTGAA ACATAGGTTG
ACAAATAACT ATGTTAATCT CACTATAGAT GAATTGGCAT TGTACAATGG AAGTGATATG
CTGTTGCCTA TCTATATCGG TGTGAATGGA TACGTGTATG ATGTTACAGC TTCTCGTGGA
ATATATGGTC CCAAAGGCTC GTATTCGAAA TTGAGCGGAA AGGACGCATC AAGATTGTAT
GTGACAGGAT GTTTTATGAA TCCTGAAGAG TACACCTATG ATTTGCGTGG ATTAAAAGAG
GAAGAAGCAA AACAGGAACT CAGCGAATGG CAACAATTCT TCGAGGAACA TCCCAAGTAT
TGGCTAGCAG GCTACGTTCA ACGACCAGAC CCTGTAGGAG AACCACCAGC TCCGTGTGAG
CATATCAAGT TTCCAGGTCG CCGTACAAAG AATGCTGGCA ATTAA
 
Protein sequence
MAGPKRTNSG ARDAFTLIDI VRVVGGLLFL NAFFSWWFTS TSTWGYNGKW INTQYLKHRL 
TNNYVNLTID ELALYNGSDM SLPIYIGVNG YVYDVTASRG IYGPKGSYSK LSGKDASRLY
VTGCFMNPEE YTYDLRGLKE EEAKQELSEW QQFFEEHPKY WLAGYVQRPD PVGEPPAPCE
HIKFPGRRTK NAGN