| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61325 |
|---|
| Symbol | ERG27 |
|---|
| ID | 4840378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 839135 |
|---|
| End bp | 840175 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640391693 |
|---|
| Product | 3-keto-steroid reductase |
|---|
| Protein accession | XP_001385525 |
|---|
| Protein GI | 150866056 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.406154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00397596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTA TTAAAGAGGG TCAAGTTGCC GTGATAACCG GGACGTCATC GAACCTTGGT
TTGAACATCG CGTACCGATT GGTAGAGCAA ACAGATCCCA AGACCAATTT GACATTAGTA
GTCACCTCAA GAACACTTCC CAAAGTTAAA GACATCATCA CAACTATCAA AGACTATGTG
GTAGAACACT TTCCAGAAAG AGTTTCGAAA ATTGAATTTG ACTATTTGTT GGTGGACTTC
GTAGACATGG TTTCTATATT ATCTGCCTAC TATGAGTTAA ACAAGAGGTA TCGTCACATT
GACTACTTGT TTGTAAATGC TGCACAGGGA GTCTACGGTG GTATTGACTG GATTGGTGCT
ACCAAGGAGA TTCTCACCGA TCCGATCGAA GGTGTGACCC ATCCAACGTA CAAAATCCAA
AAGGTTGGTG TCAAGTCTAG TGATGGTATG GGATTGGTTT TCCAAGCTAA CGTGTTTGGA
CCTTACTATT TTATCCATAG AATCAAACAC TTGTTGCAAA ATGGCGGACG TATAGTATGG
ATATCTTCCA TTATGTCTAA GCCAAAATAT TTATCGTTCA ACGATCTCCA ATTGATCAAG
TCTCCTGAAT CGTACGAGGG CTCCAAGAGA TTGGTGGATT TATTGCACTT TGGTACATAC
AAAACATTGG CGAAAGACTA TAACATTCAA CAACTGCTTG TCCATCCAGG TATATTCACC
AGTTTTTCGT TTTTCCAATA CTTGAATTTC TTCACCTATT ATTCAATGTT GGTGTTGTTC
TATATTGCAA GATGGTCTGG ATCTCCTTAC CATAACATAT CAGGTTATAT AGCCGCCAAT
GCTCCTGTCA AGTGTGCCGT TGGAAAGGAA AAGCAAGATG TTAAAGTAGA ATCTTGCAGT
ACAAGATACG GTCAAGAATA CATTCGCTAC CAGGAAATAG ACTCAACTGG TTCCGAGGAT
GTGGTTGCTT ACCTCGACAA ACTTGTACAA GAATGGGACG TTAAGTTAAA GGACCAGATA
ACGAGTACTA GACTTCCTTG A
|
|---|
| Protein sequence | MSLIKEGQVA VITGTSSNLG LNIAYRLVEQ TDPKTNLTLV VTSRTLPKVK DIITTIKDYV
VEHFPERVSK IEFDYLLVDF VDMVSILSAY YELNKRYRHI DYLFVNAAQG VYGGIDWIGA
TKEILTDPIE GVTHPTYKIQ KVGVKSSDGM GLVFQANVFG PYYFIHRIKH LLQNGGRIVW
ISSIMSKPKY LSFNDLQLIK SPESYEGSKR LVDLLHFGTY KTLAKDYNIQ QSLVHPGIFT
SFSFFQYLNF FTYYSMLVLF YIARWSGSPY HNISGYIAAN APVKCAVGKE KQDVKVESCS
TRYGQEYIRY QEIDSTGSED VVAYLDKLVQ EWDVKLKDQI TSTRLP
|
|---|
| |