| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61269 |
|---|
| Symbol | SIW14 |
|---|
| ID | 4839839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 1057153 |
|---|
| End bp | 1057917 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640391154 |
|---|
| Product | tyrosine phosphatase |
|---|
| Protein accession | XP_001385557 |
|---|
| Protein GI | 150866081 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.115232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.236513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GATATCACAC CTAGATATGC GGACATCCTT GATTCGCAGC GACTTTACGA CGACAACAGA
TTTATACGGA CAAAGCTTGA GCAACTCAAA CTCGAAGAGG GAGCATTTAC AGGAGGTACC
AACACTACCG AAGAAGAAAG TGAACAACAA GTTGATGAAG AGAGGGCATA CGAAGAAGAC
CTAGACGATA AACTAGATAT GAAATTACAG AGAAAATTGC AGAAAGAGTA TGAATCCAAC
TTGAAGTTCC ACATTCTGCA GCCTCTCACA CCACCAGAGA ATTTTGCCCC AATCATCAAC
AAGATCTACA GGTCTTCTTT TCCTCAACCA AACAACTTTA CATTCTTGAG AAAGCTAAAA
TTGAAGTCTG TGCTTTGTTT GATTCCCGAA GAATACCCTC AGCTTCATCT TGAGTTCTTG
GAGCACGAGA ACATCAAACT TTTCCAGTTG GGAATGTCAG GAAACAAAGA GCCGTTTGTG
AAAATCAGTT CAGACTTGAT TACTGAAGCA GCAAAAATAG TTCTCAATCC AGAAAACCAG
CCAATCTTGA TCCATTGCAA TAGGGGCAAA CATAGAACCG GATGCTTGGT AGGAGTATTA
CGTAGGTTAC AGAAATGGTC GTTAACGATT ATCTTTGACG AGTACAGAAA GTTTGCCGCT
CCTAAGGAAA GACCCATGGA TCAGCAGTTT ATCGAGTTGT ATGATGAGAC TCCTATAATC
AGGTATGCTG AAGAGAACAA TCTTCTCCCA TTGCAATGGG ATTAG
|
|---|
| Protein sequence | DITPRYADIL DSQRLYDDNR FIRTKLEQLK LEEGAFTGVD EERAYEEDLD DKLDMKLQRK
LQKEYESNLK FHISQPLTPP ENFAPIINKI YRSSFPQPNN FTFLRKLKLK SVLCLIPEEY
PQLHLEFLEH ENIKLFQLGM SGNKEPFVKI SSDLITEAAK IVLNPENQPI LIHCNRGKHR
TGCLVGVLRR LQKWSLTIIF DEYRKFAAPK ERPMDQQFIE LYDETPIIRY AEENNLLPLQ
WD
|
|---|
| |