Gene PICST_49115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49115 
Symbol 
ID4840305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp379120 
End bp379494 
Gene Length375 bp 
Protein Length124 aa 
Translation table12 
GC content41% 
IMG OID640391620 
Productconserved hypothetical protein 
Protein accessionXP_001385423 
Protein GI126137800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0617812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC CTCCACAAAG AGAACGTTTA CCTTCTCGGC TTGATATCCT TTCCAATGGT 
CATAAGCTTG ATGTGCGTGC CCACCAAAGG ACCTACGAAG GAGCTTACAC CCGCTCTGCA
ATTGGGTGTT TGTCATTTTC CATTCTCATT ATAAAGCTTT TCTCTAAGGA ATTCTTGCCA
ATAGGAACTA TATACACAGT TTATGGTTCT CTTCTTTACT TCATTGGAGT CTACAAAGCT
TCTTCGGTCG ATACATACTA TAATCCTGAC AAGGACATGG TTATGTTCAA GACCAGTGGA
GACTCTGTAC TTCTATTATC GGTAATTAGT CTAGTAAGTT ATGTTGCCTT GCTAGTGCTA
ATCTTACGGA TGTGA
 
Protein sequence
MEQPPQRERL PSRLDILSNG HKLDVRAHQR TYEGAYTRSA IGCLSFSILI IKLFSKEFLP 
IGTIYTVYGS LLYFIGVYKA SSVDTYYNPD KDMVMFKTSG DSVLLLSVIS LVSYVALLVL
ILRM