Gene PICST_49011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49011 
Symbol 
ID4839892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp69396 
End bp71021 
Gene Length1626 bp 
Protein Length541 aa 
Translation table12 
GC content41% 
IMG OID640391207 
Productpredicted protein 
Protein accessionXP_001385346 
Protein GI150865931 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT CAAGAGTGCT GCTAAACAGT AATTGTCTTT TGAGGATAAA AGATGCCATC 
TTCAGAATCG ACAATTCTTC TAATTCACTG TTGATTTTCT CCAAGCCAGT ATCTCACTTC
GAAATATATA AACCCAACCA GGCTAATAAA CCTTCGTTCT GGTCGGTATC AGGACCTGAA
AAGTCTCGTT TCTTGTCCAT AGTCGCAGGA AGGTACATTC CTTCGCCGCC ATTATCTCGT
TCGTACCCCT TTCTTTCAGA GACTTTCGAA TATCTGAAAA TTCAGTTTCT CGACTTCAGA
GACAGCTCCG GTCTTGACAA GGTTCACTTG TCCGCTCGTT ACGAGACGTA TTCATATAGA
GGAGAGGTGG AAATGTCAGA CGATGTCAAT TCTGTGAGAA ACTACATTAC GGGAGCTAAC
AACTATAACA AGGATACCAG TGAAATAACG TCTGATTATG TCGACAAATT GATCAATTTG
TTCAATTTGG ACCATCTCTC ACATAAGTGG ATTAACTCGT TAAGTAATGG ACAGATGAGA
AGAGCCAGGA TTGCCAAATC TCTAGTTTCG AAACCTAGTT TACTAATCAT AGACGATCCA
TTCTTGGGGT TAGATCCTGG AGCCACGGAG ATGGTCTCTG ACTCCTTGAA TAGAGTCAGC
CAATTATTGG GAGCGAGTGT CGTCCTAGGA TTGAGAGTAC AAGATGATAT CCCGAATTGG
ATAAATAGCA TAGCCTATGT AGACGAGACG GGTTTGAAAG TGAGTGGGCC AAAAGAAGAG
ACTTTGCAAC AGCTACACGA GGAAACTAGT CAATTAGATA TAACCCATGC TGACCATGAA
AAACGCCATA CTAAGCATCA GAATCCAGTT GAAATTTCCA ATGAAGAGTT GTTTGAAGGA
AGCACTATTC CTGCTCACAT AGAGTTCAAC AATGCTTCAG TATCGTATAG GGGATTGAAG
ATTCTTGACA ATTTTAAGTG GAAAATTCCA CGAAGATCTA AATGGAGGAT CCTTGGAGAT
AATGGAACAG GTAAGACTAC TCTTCTTTCG TTTATCACCG CTGACCACCC ACAGTCCTGG
AGATCTGTGT TGACCATTGA TGGTGTGGTG CGTAAGACTG GTAATGGAGT GACTTTCTTT
GAGGTGAACA ATAAAATTGG ACTATCCTCT CCCGAGTTAC ATGCACTTGT CCCTCAACAT
ACACGTACTA TGAGAGACAT CATCTTGAAT GGAATTGTAA AAGATGTGGG TAATTCCAAC
TTCTTGTTCA GAGGGAAAGA AGAGAATTTG ACCAACTTCG CCAGAGGTAT ATTAGCGTTA
TTTGCTGATA GGCTAGAAGC CAACGGAAAC AAAAAATTCA CTGACCTCTC AATGACTGAC
CAGAAATTGA CGTTGTTCCT CAGAGCAATT ATCAAAAACC CAGACCTTCT TATTCTTGAT
GAAGCATTCT CTACTATGGA TGATGAAGAC GTCATGATCA GATGCCACGA CGTGATTGAA
AATCACTTGC CAAACACAAC AGTTTTGGCA ATTGGACACA TCGATTGGGA AGTGCCTCGT
TGTGACTACT TGTTGAAGTT GATAGGTGAT GAAGAGAGAA ACTACAAGGT GTACAAGTAT
ACATAG
 
Protein sequence
MKPSRVSLNS NCLLRIKDAI FRIDNSSNSS LIFSKPVSHF EIYKPNQANK PSFWSVSGPE 
KSRFLSIVAG RYIPSPPLSR SYPFLSETFE YSKIQFLDFR DSSGLDKVHL SARYETYSYR
GEVEMSDDVN SVRNYITGAN NYNKDTSEIT SDYVDKLINL FNLDHLSHKW INSLSNGQMR
RARIAKSLVS KPSLLIIDDP FLGLDPGATE MVSDSLNRVS QLLGASVVLG LRVQDDIPNW
INSIAYVDET GLKVSGPKEE TLQQLHEETS QLDITHADHE KRHTKHQNPV EISNEELFEG
STIPAHIEFN NASVSYRGLK ILDNFKWKIP RRSKWRILGD NGTGKTTLLS FITADHPQSW
RSVLTIDGVV RKTGNGVTFF EVNNKIGLSS PELHALVPQH TRTMRDIILN GIVKDVGNSN
FLFRGKEENL TNFARGILAL FADRLEANGN KKFTDLSMTD QKLTLFLRAI IKNPDLLILD
EAFSTMDDED VMIRCHDVIE NHLPNTTVLA IGHIDWEVPR CDYLLKLIGD EERNYKVYKY
T