Gene PICST_48996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48996 
SymbolPAP2 
ID4840169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1595383 
End bp1596819 
Gene Length1437 bp 
Protein Length478 aa 
Translation table12 
GC content41% 
IMG OID640391484 
Productprolyl aminopeptidase 
Protein accessionXP_001386007 
Protein GI150866415 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.750097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.224061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCGT ATGAAATTGT AGATTTTTTC CGTGTTAAGG ACATTGTCAA CTACAGACTC 
AAATTCCAAG TTCCTCTCTC GTATTCTGGG GTTGAAATTC CCGGTTGCAC TGTAAAGGAA
ATATATGTTG TAGCAAATAT CACCCAGAAG TATGATGAAA AGTTGCACGA TGTCCGCGTA
TTTCCAGAAG CTAAGACGAA TTTGGTTCTA CCAGAAAAGC CCAAGATAAT CTGCTATGTT
CAAGGTGGTC CCGGGTTTCC CTGTGGTGTG CCGTTATCGA GTACTGCCTT CACCAAGGTC
TTGTTGGATA GAGGGTACCA AATTCTCTTT TTGGATCAAA GAGGAACAGG CCTTTCTACA
CCCTTAGAAG TGGGTACTTT CAGCCATTTA CTTCCACAGA TAAATGGCGA ACTGAAGGAA
GAATATGCTT CTAGACAGTT AAAGTTTATC GTCAACTTCA GAGCCGATTC TATAGTGGAA
GATTACGAAT TTGTGAGAAA AGCATTGGGC ATTGAAAAAT GGTCGCTATT AGGGCAATCG
TATGGGGGAT TCACGTCATT CACCTATTTG TCCAAATATG ATACTTCATT GAAGGAAGTG
TTGGTCACTG GTGGTGTTCC TCCAATCAAC TTCTCACCGG ACGATGTTCA TTCGGCAACC
TATGCCCGAA CCAGAGAAAG AAACGAACAT TATTACGATA AATACCCTCA GGACAAACTA
AAAGTTAGAA ATATTCTCAC GTATCTCTCC AAAAACAAAG TCACTCTTCC TAACGGTGGC
AATTTGAGCG TAGAACGTTT CCAGCAGTTG GGATTGTTGT TTGGTGCTAG CGGAGGAACT
GATCATATTC ATCAATTGGT AGTAAAGTTC GACTACGACT TGTCGACTTT CGGATTCCCC
ACTTATCAGA TCCTTAATGA AGTTCAGAAC GACTCTACTT TCGATACAAA TGTCATTTAC
CCGTTGTTCC TCGAAGCAAT TTACTGTGAT GGAACTGGAT TGGGAAAGAA GCTGAGTGAA
TGGAGTAGCG ATAGATTAAG ATACGCTACA GAAAACACGA AATTTGTCTT CAGCGAGGAC
TCAGACCACG AAGTTTACTT CACCGGCGAA ATGGTCTATA AGTCGTTGTA CGAAGATTTT
GCTGAATTGA AGAAATTCAA GGAGCTTGCT TATGCTCTTC ACAACAATAA AGAATGGAGC
TCCTTGTACG ATGCTAAAAG GTTGTATGAA ACCAAGGTTC CAATTGTGTC AGCTACTTAC
GTCTACGACC AATTTGTTGA TTTCGACTTG ACTAGAGCGG TTAAGAAAGA AGTGTTTAAG
GGTAATGGAA ACTTGAAGCA GTATATCTCC AGTGAATTCT TTCATAATGG GGTTAGAGCG
GACGCCGAAA AAGTGTTGGG TTCGTTGTTC GATCTTCTCG ATTGTGAGAT TGATTAA
 
Protein sequence
MVSYEIVDFF RVKDIVNYRL KFQVPLSYSG VEIPGCTVKE IYVVANITQK YDEKLHDVRV 
FPEAKTNLVL PEKPKIICYV QGGPGFPCGV PLSSTAFTKV LLDRGYQILF LDQRGTGLST
PLEVGTFSHL LPQINGESKE EYASRQLKFI VNFRADSIVE DYEFVRKALG IEKWSLLGQS
YGGFTSFTYL SKYDTSLKEV LVTGGVPPIN FSPDDVHSAT YARTRERNEH YYDKYPQDKL
KVRNILTYLS KNKVTLPNGG NLSVERFQQL GLLFGASGGT DHIHQLVVKF DYDLSTFGFP
TYQILNEVQN DSTFDTNVIY PLFLEAIYCD GTGLGKKSSE WSSDRLRYAT ENTKFVFSED
SDHEVYFTGE MVYKSLYEDF AELKKFKELA YALHNNKEWS SLYDAKRLYE TKVPIVSATY
VYDQFVDFDL TRAVKKEVFK GNGNLKQYIS SEFFHNGVRA DAEKVLGSLF DLLDCEID