Gene PICST_48982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48982 
Symbol 
ID4839812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1350539 
End bp1350775 
Gene Length237 bp 
Protein Length78 aa 
Translation table12 
GC content41% 
IMG OID640391127 
Productpredicted protein 
Protein accessionXP_001385954 
Protein GI126138862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.317537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAT TAAATGTCAA GGAGCAACAG GAGTTCCAAC AGATTGTTGA ACAAAAGCAA 
ATGAAGGACT TCATGAACTT GTACTCCAAC CTTGTTTCCA GATGTTTTGA AGACTGTGTC
AATGACTTCA CTTCTGCCAA CTTGTCGGCC AAGGAAACCA GTTGTATTGC CAAATGTTCT
GAGAAGTTCT TGAAGCATTC TGAACGTGTT GGCCAGAGAT TCCAGGAACA AAAGTAA
 
Protein sequence
MDQLNVKEQQ EFQQIVEQKQ MKDFMNLYSN LVSRCFEDCV NDFTSANLSA KETSCIAKCS 
EKFLKHSERV GQRFQEQK