Gene PICST_48859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48859 
Symbol 
ID4839748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp124121 
End bp124525 
Gene Length405 bp 
Protein Length134 aa 
Translation table12 
GC content43% 
IMG OID640391063 
Productpredicted protein 
Protein accessionXP_001385717 
Protein GI126138388 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.815373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAATCCAGAT TTATCTCGAC TGAAATTAAA GATGCTATAG ACAAGGCTGT GGCCAGCTCA 
CCTGTAGTAT TGTTTATGAA GGGTACACCT GAGTTCCCAC AATGTGGTTT CTCTAGAGCT
ACTATACAGA TGTTAGGTCA ACAGGGTGTT GATCCTGAGA AGTTTGCTGC CTACAATGTT
TTGGAAGATC CAGAATTAAG AGATGGAATC AAGGAATACA GCTCATGGCC CACCATTCCA
CAATTGTATG TGAACAAGGA GTTTGTTGGA GGTTGTGATA TTGTCATGAG CATGGCACAG
AGTGGAGAAT TGGCTGAATT ATTAGAAGCC AACGATGCTT TGGTTCCTGA GGATGTCGAA
GAAGAACCGC AAGCTGCCAA CGTCAAGCCA TCTGAAAGAT CATAG
 
Protein sequence
QSRFISTEIK DAIDKAVASS PVVLFMKGTP EFPQCGFSRA TIQMLGQQGV DPEKFAAYNV 
LEDPELRDGI KEYSSWPTIP QLYVNKEFVG GCDIVMSMAQ SGELAELLEA NDALVPEDVE
EEPQAANVKP SERS