| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48804 |
|---|
| Symbol | RPA12 |
|---|
| ID | 4840212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 1539214 |
|---|
| End bp | 1539585 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640391527 |
|---|
| Product | DNA-directed RNA polymerase I subunit A12 (RPA12) |
|---|
| Protein accession | XP_001385648 |
|---|
| Protein GI | 126138250 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.673964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTG TCGGCTCGCT AATATTCTGT ACCTTCTGTG GTAATCTTTT GGACGCTACC
AGCAGCACCA ACGAAATAAA ATGCGGTTTG TGTTCTGCTG GATATCCTAA ATCTAAATTT
GCCAACTTGA AAGTTGTAAC GACTTCGTCA GAGGACGCCT TTCCTTCCGT TTTAAAGATG
AACAGATCCG TAGTGAAGAC TTCTTTGAAG AAGGATGAAT TGGACGACGG TGCCACCATC
AAGGAAAAAT GTCCTAAGTG TGGAAACGAA GAAATGCAAT ATCATACATT ACAGTTGAGA
TCTGCTGATG AAGGTGCTAC TGTCTTTTAC ACATGTACCT CATGTGGGTA CCGTTTCAGA
ACCAACAACT GA
|
|---|
| Protein sequence | MSVVGSLIFC TFCGNLLDAT SSTNEIKCGL CSAGYPKSKF ANLKVVTTSS EDAFPSVLKM
NRSVVKTSLK KDELDDGATI KEKCPKCGNE EMQYHTLQLR SADEGATVFY TCTSCGYRFR
TNN
|
|---|
| |