| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48539 |
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| Symbol | |
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| ID | 4840382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 861118 |
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| End bp | 861651 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391697 |
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| Product | predicted protein |
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| Protein accession | XP_001385863 |
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| Protein GI | 150866314 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.07066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGAAG AAGGTAAACA TCACGCGGAC TACAGCAACG TTACTGGGTT ATCCAAAGAA
GAAACTTTGC AACACATCAT CGACTCCTAC GAGGCTCTTG CCAGTGACAC TACAAATTGG
GTTGCAAACT TGTCCAATTG TTCGTCTTTG GTATGGCATG CTTACCATTC TTTGAATGTT
CCTGTTAACT GGGCTGGTTT CTACGTTAAG AATGGGGAGA AGAACGAATT AATTTTGGGT
CCATTTCAAG GAAAAGTAGC ATGTCAAATC ATTCAGATTG GAAAAGGTGT TTGTGGAACG
GCTGCTCATT CTAAGGAAAC CCAGTTGGTT CCAGACGTTG AAAAATTCCC AGGCCACATT
GCTTGTGATG GTGAAACTAA GAGTGAAATA GTGGTACCAT TGGTTAAAGA AGGGAAAATT
TTGGCTGTCT TGGATATAGA TTGTTTGGCA TTAGATGGTT TCGATGAACT GGATAAAAAG
TTCTTAGAAG AATTGGCCGT ATTGATCGTG AGGACTTGTG AATGGCAATT TTAG
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| Protein sequence | MGEEGKHHAD YSNVTGLSKE ETLQHIIDSY EALASDTTNW VANLSNCSSL VWHAYHSLNV
PVNWAGFYVK NGEKNELILG PFQGKVACQI IQIGKGVCGT AAHSKETQLV PDVEKFPGHI
ACDGETKSEI VVPLVKEGKI LAVLDIDCLA LDGFDESDKK FLEELAVLIV RTCEWQF
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