Gene PICST_48488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48488 
Symbol 
ID4839896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp88151 
End bp88552 
Gene Length402 bp 
Protein Length133 aa 
Translation table12 
GC content43% 
IMG OID640391211 
Productpredicted protein 
Protein accessionXP_001385708 
Protein GI126138370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCTA CGCATCCAGA TTTGGAAGTT ATCAAATTCG TCACTAACGT CGTGGGCCGG 
GATCCAATTG AGACTCCTGT TTCTGGAGCA GAGACTATCG ATGTCAAAAT TCCCGAAAGC
TCTAAGTTTG TCATGACCAT TCATTTCAAG GTCAAGAACA GAGCCTTGAA GAACTTCAAG
TACAAACAGG TCGTCAAGAA AGCTGGTATT ACCATCAGGA ATCAGGAGTT CCTCATTGGT
GACTATGAGC CTTCTGATGA AGTCTACACC AAGGATTTCC CAGAAGATAC TACTCCTGGT
GGATTTTTGA TGAGAGGGGT ATACCCAAGT CACTCCTTGT ACTTCGACGA AGTGGAACAG
TTATTGGATG TGAAATGGGA CTTGGAAATT ACCAAGAAAT AG
 
Protein sequence
MLPTHPDLEV IKFVTNVVGR DPIETPVSGA ETIDVKIPES SKFVMTIHFK VKNRALKNFK 
YKQVVKKAGI TIRNQEFLIG DYEPSDEVYT KDFPEDTTPG GFLMRGVYPS HSLYFDEVEQ
LLDVKWDLEI TKK