Gene PICST_48474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48474 
SymbolDAL9 
ID4840009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp542877 
End bp544454 
Gene Length1578 bp 
Protein Length525 aa 
Translation table12 
GC content39% 
IMG OID640391324 
Productallantoate permease 
Protein accessionXP_001385453 
Protein GI150866003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.525074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAA GAGAGGAAAA TATTGACAGC AAGGACAATG TTATGGTTTC AATTTCGAGT 
CCGCTGACAG GCAGGCAGGC AAAACCTGAC GGAGACGTTG ATGATGCAAT GGAGTATGCA
ATAAGAAATA AAACAGAAAA CCCAAAATAT GACAAATCAA GAGATGCAAA GCTTCTAAGA
AAGATTGACT TCTTTTTAAT GCCAATTATA TGCTGTCTCT ATGCCATTCA ATTTATGGAT
AAATTGACCA ATTCACTAGC TTCCATTCTC GGATTACGTA CTGAATTGAG AATGCATGGC
AATATGTATT CTTGGACTGG CTCAGCATTT TACTTGGGTT ACATGGTATT TGAATTTCCT
GCTGTACGTT TCTTGCAACT GTTTCCAGTT TCTAAAACAC TAAGCGTTTT CATTGTTCTT
TGGGGTGTGG TTCTATGTCT TCACTCAATT CCAAACTACG CTGGCTTTGT AGCACTAAGA
ACTATCCTTG GAATACTCGA AAGCTCAATT ACTCCAGGTT TGGTCATTAT AACTAGTCAA
TATTACCGTG GTGCTAATCC TGACGCTGGT GCAAAAGAGA AAAGCAAATA CAAAGATGAA
ATATTTCTTC GTACTGCTTG GTGGTTTGCT AGTACTGGGT TCGGTATTAT CGTTGGTTCA
GCAATTGCAT ATGCAATTGT GGTTCATCAA GATTCCTACT CTATCCAAGC TTGGAAGCTA
ATATTCATCG TCACTGGTGT AATCACTATT TTCGTTGGAT TAGTTTTCTT AGTCCATGTT
CCTGATAAGC CCACCAAAGC GTGGTTTCTC ACTGAAGAAG AAAAGAAGTT AGTGGTCGAG
CGTATCAGAG TTAATCAACA AGGTTTTGGA AACAAAAAAT TCAAAATTTA CCAATTCAAG
GAAGCCCTCT TGGATTTGAG GACTTGGTTG TTCTTTCTCG CTGCTTTGAG TATCAGTCTC
CCAACTGGTG GATTGACAAA CTTCGGAAGC ATTTTGCTTG CTGAAGGCTT TGGCTACTCG
CTAAAAAAGA CCATGTTAAT GCAAATGCCA GTTGGCGCAG TTAACATTTG CGGATGTGTC
ATTTTTGCCT GGCTTCATCG ATTTGTTGAA TCTAGAATGT TTTGGGCTAC TTTTGGCAAT
GCTGTCACAT TTGCTGCCCA ATGTATGCTT GCGTTCGGAA AGACGAACCA GATCATGTTT
GCCGGTTATA TAGTGCAATC CCTCGGTCCC ATTGCTTTTA TCTGCTTGTT GGCAAATATT
TCTAGTAATG TTACTGGACA TACCAAGAAA GTTACTGTTA ATGCTATCTT ATTGGTTGGA
TATTGTGTTG GTAATTTAAT TGGGCCGCAG ACTTTCTTGG ATTCAGAAGC TCCAAATTAT
AAGACAGCCA AAGCATGCAT CGTTGCTTTT GGTCTTTTGA ATTTACTATT ATTTGTTCTT
ATCTGGTTGA GTTATTTGTG GGATAACCGA AAGAAGAATA GAGCATATGC TGAGGCTGGA
GAAATCGATA TGTTCGAAAA CTACGAATTT GCTGATTTAA CGGACAAGGA GAATCCTCTC
TTCAGGTACA AGATCTGA
 
Protein sequence
MSSREENIDS KDNVMVSISS PSTGRQAKPD GDVDDAMEYA IRNKTENPKY DKSRDAKLLR 
KIDFFLMPII CCLYAIQFMD KLTNSLASIL GLRTELRMHG NMYSWTGSAF YLGYMVFEFP
AVRFLQSFPV SKTLSVFIVL WGVVLCLHSI PNYAGFVALR TILGILESSI TPGLVIITSQ
YYRGANPDAG AKEKSKYKDE IFLRTAWWFA STGFGIIVGS AIAYAIVVHQ DSYSIQAWKL
IFIVTGVITI FVGLVFLVHV PDKPTKAWFL TEEEKKLVVE RIRVNQQGFG NKKFKIYQFK
EALLDLRTWL FFLAALSISL PTGGLTNFGS ILLAEGFGYS LKKTMLMQMP VGAVNICGCV
IFAWLHRFVE SRMFWATFGN AVTFAAQCML AFGKTNQIMF AGYIVQSLGP IAFICLLANI
SSNVTGHTKK VTVNAILLVG YCVGNLIGPQ TFLDSEAPNY KTAKACIVAF GLLNLLLFVL
IWLSYLWDNR KKNRAYAEAG EIDMFENYEF ADLTDKENPL FRYKI