Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_48097 |
Symbol | KTR4 |
ID | 4840284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 674898 |
End bp | 676313 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391599 |
Product | Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) |
Protein accession | XP_001385480 |
Protein GI | 150866018 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5020] Mannosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.51353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCAG TGCTATCAAT CAGACTAAAG AGGGTTATCT TGGTGTTTTC TCTTATTGCC GCATGTGTTC TTGTACTTAT AGGAATAGGT ACTGTAGAAA TCAGTAGCTC GTACTATAAC AAGGAAATGA TTTCTAGTGG GATCCAGTCG TTGACCGACA AGTTTGATTT TTCGTACTTA CAACCAGGCA ATAATGGATC ATATAACTTG TGGAATATGA AGAGTTCAAC ACTTGAACAA ACAGGCTTCA TCATCGAGCC AAACAATGTC CAATTCAAGT TCACTAACCC CTTGGGCAAG AAAGGAACCC CACAAGAGAT ACAGGAACAA AATGATAAGA GATACGCCCA AGTGTTTGAC AAACAGATCA CAGAACCAAA AGATTTCGAT ATCGAGTCCA TTCGTCCCCC TGCAGACCCG AAGAAGTACA AGCTTGCCAA TGCTACCATC ATAGCCTTGG TTCGTAATAA CGAAGCTAGC TCTATAGGTA AAACCATTAG AAGATTCGAA AAGAAGTTCA ACGATAAGTT TCATTACCCA TACACTTTTT TGAACGACGA GCCGTTTACT GATGCATTCA AATCTCGTAT TGCCAAATAC ACAGACGCTC CTATGGAGTT TGTGACTGTT GGACCTGAGT TCTGGAAGAA GCCTAGTTTT ATAGATGAAA CCCGTCAGAA GGTAGAGATG GACAAATTAC AAGCTCAGAA CATCGCCTAT GCCACTATGG AGTCGTACCA TAACATGTGC CGGTTCTACC TGGGCATGTT CTACAATCTT CCCGAGTTAC AGAAGTACAA GTACTACTGG AGAATAGAGC CCAATGTCAA CTTTTACACG GATATCAAGT ACGATGTATT TAAATATCTA CAGGGTACTG GCAAGAAATA TGGTTTCACG ATCAATTTGT ACGATATTCA CGAAACTGTG GTTTCGTTAT GGCCCGAGAC TCTTCGTTTC TTAAACTTGG GAAACAACTA CAAATACGTC AATAAGAACG GCGCTTTCCA GTGGCTTTTA GAACCACATC AAAACCCCAA AAAGAATTCC GATACCGGTG GATACTCTAC TTGTCATTTC TGGTCCAATT TCGAAATCGC TGATATGGAT TTCTACAGGA GCGAAGCCTA CAATGAATGG TTCAAACATC TTGATAGGTC CGGTGGGTTC TACTATGAAC GATGGGGTGA TGCTCCTGTT CATTCATTGG GATTGTCTCT CTTTGCTGAC AAAAAAGATA TACATTGGTT CAGAGATATT GGCTATTTCC ATGATCCATA CTTCAACTGC CCCAAGAGCG AGAACACCAA GCTCTGTAGT GCCGGTCGCT TCAGCAGATG GGATCACTTG AACGATCAGA ACTGTATGTC AAGTTGGATA GATTACTCGA TAGACGACTT GGATAAGATA TACTGA
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Protein sequence | MISVLSIRLK RVILVFSLIA ACVLVLIGIG TVEISSSYYN KEMISSGIQS LTDKFDFSYL QPGNNGSYNL WNMKSSTLEQ TGFIIEPNNV QFKFTNPLGK KGTPQEIQEQ NDKRYAQVFD KQITEPKDFD IESIRPPADP KKYKLANATI IALVRNNEAS SIGKTIRRFE KKFNDKFHYP YTFLNDEPFT DAFKSRIAKY TDAPMEFVTV GPEFWKKPSF IDETRQKVEM DKLQAQNIAY ATMESYHNMC RFYSGMFYNL PELQKYKYYW RIEPNVNFYT DIKYDVFKYL QGTGKKYGFT INLYDIHETV VSLWPETLRF LNLGNNYKYV NKNGAFQWLL EPHQNPKKNS DTGGYSTCHF WSNFEIADMD FYRSEAYNEW FKHLDRSGGF YYERWGDAPV HSLGLSLFAD KKDIHWFRDI GYFHDPYFNC PKSENTKLCS AGRFSRWDHL NDQNCMSSWI DYSIDDLDKI Y
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