Gene PICST_48097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48097 
SymbolKTR4 
ID4840284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp674898 
End bp676313 
Gene Length1416 bp 
Protein Length471 aa 
Translation table12 
GC content41% 
IMG OID640391599 
ProductGlycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) 
Protein accessionXP_001385480 
Protein GI150866018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5020] Mannosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.51353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCAG TGCTATCAAT CAGACTAAAG AGGGTTATCT TGGTGTTTTC TCTTATTGCC 
GCATGTGTTC TTGTACTTAT AGGAATAGGT ACTGTAGAAA TCAGTAGCTC GTACTATAAC
AAGGAAATGA TTTCTAGTGG GATCCAGTCG TTGACCGACA AGTTTGATTT TTCGTACTTA
CAACCAGGCA ATAATGGATC ATATAACTTG TGGAATATGA AGAGTTCAAC ACTTGAACAA
ACAGGCTTCA TCATCGAGCC AAACAATGTC CAATTCAAGT TCACTAACCC CTTGGGCAAG
AAAGGAACCC CACAAGAGAT ACAGGAACAA AATGATAAGA GATACGCCCA AGTGTTTGAC
AAACAGATCA CAGAACCAAA AGATTTCGAT ATCGAGTCCA TTCGTCCCCC TGCAGACCCG
AAGAAGTACA AGCTTGCCAA TGCTACCATC ATAGCCTTGG TTCGTAATAA CGAAGCTAGC
TCTATAGGTA AAACCATTAG AAGATTCGAA AAGAAGTTCA ACGATAAGTT TCATTACCCA
TACACTTTTT TGAACGACGA GCCGTTTACT GATGCATTCA AATCTCGTAT TGCCAAATAC
ACAGACGCTC CTATGGAGTT TGTGACTGTT GGACCTGAGT TCTGGAAGAA GCCTAGTTTT
ATAGATGAAA CCCGTCAGAA GGTAGAGATG GACAAATTAC AAGCTCAGAA CATCGCCTAT
GCCACTATGG AGTCGTACCA TAACATGTGC CGGTTCTACC TGGGCATGTT CTACAATCTT
CCCGAGTTAC AGAAGTACAA GTACTACTGG AGAATAGAGC CCAATGTCAA CTTTTACACG
GATATCAAGT ACGATGTATT TAAATATCTA CAGGGTACTG GCAAGAAATA TGGTTTCACG
ATCAATTTGT ACGATATTCA CGAAACTGTG GTTTCGTTAT GGCCCGAGAC TCTTCGTTTC
TTAAACTTGG GAAACAACTA CAAATACGTC AATAAGAACG GCGCTTTCCA GTGGCTTTTA
GAACCACATC AAAACCCCAA AAAGAATTCC GATACCGGTG GATACTCTAC TTGTCATTTC
TGGTCCAATT TCGAAATCGC TGATATGGAT TTCTACAGGA GCGAAGCCTA CAATGAATGG
TTCAAACATC TTGATAGGTC CGGTGGGTTC TACTATGAAC GATGGGGTGA TGCTCCTGTT
CATTCATTGG GATTGTCTCT CTTTGCTGAC AAAAAAGATA TACATTGGTT CAGAGATATT
GGCTATTTCC ATGATCCATA CTTCAACTGC CCCAAGAGCG AGAACACCAA GCTCTGTAGT
GCCGGTCGCT TCAGCAGATG GGATCACTTG AACGATCAGA ACTGTATGTC AAGTTGGATA
GATTACTCGA TAGACGACTT GGATAAGATA TACTGA
 
Protein sequence
MISVLSIRLK RVILVFSLIA ACVLVLIGIG TVEISSSYYN KEMISSGIQS LTDKFDFSYL 
QPGNNGSYNL WNMKSSTLEQ TGFIIEPNNV QFKFTNPLGK KGTPQEIQEQ NDKRYAQVFD
KQITEPKDFD IESIRPPADP KKYKLANATI IALVRNNEAS SIGKTIRRFE KKFNDKFHYP
YTFLNDEPFT DAFKSRIAKY TDAPMEFVTV GPEFWKKPSF IDETRQKVEM DKLQAQNIAY
ATMESYHNMC RFYSGMFYNL PELQKYKYYW RIEPNVNFYT DIKYDVFKYL QGTGKKYGFT
INLYDIHETV VSLWPETLRF LNLGNNYKYV NKNGAFQWLL EPHQNPKKNS DTGGYSTCHF
WSNFEIADMD FYRSEAYNEW FKHLDRSGGF YYERWGDAPV HSLGLSLFAD KKDIHWFRDI
GYFHDPYFNC PKSENTKLCS AGRFSRWDHL NDQNCMSSWI DYSIDDLDKI Y