| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48002 |
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| Symbol | |
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| ID | 4839948 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1179780 |
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| End bp | 1183574 |
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| Gene Length | 3795 bp |
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| Protein Length | 1239 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391263 |
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| Product | predicted protein |
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| Protein accession | XP_001385923 |
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| Protein GI | 150866353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.483888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCAAACGTTA ATTCTATCTC CAACAATAAT GACAACACTG TGTCCAATGC AGAATCAGTT
TCGACTCCTA CTACCAGCAC TTCGCCAAGT GGCACCAGTG TTGATGGCAG CAGCGGTCGC
GTATACGAAC GAACTGTTTT ACCACCGTCT GAACTCGTAG AATATCCGTT TAAAACGTTG
AACAGAATTC TAGATGATAT GAAATGGACG ATTCCCATGA AACAAAAGTT CAACATCAGC
TTGTTGAACA GTATACCGTT TGATTACTCC ACAGAATTAA GTAAACTCGC TGGATCGCCT
TTGTTTGTGT ATGAAGCTCT TACTCTAAAC AATTCGCTCA ACTACTCCCC GTCGTTGGAG
ACAGTTGATT ATGAAGACAG AAACCAGACA CTTTCCACAA TAAGAGGTCT TCTTGTCAAC
ACAAGCTCCA GCAGCTCTGC CAAAGCAGTA TTTCACTTCC GGATCTCGAT TCTCGAAACG
AACACCAATC CATTCATCTC CAGTGCTCTT GATAAACACG AATATCATAT CATTCCTAAA
CTGAGAATCT CTTCTGACGA CTTAGAAGCT CTTCATGTGC TTCCCAAGGA AGACCCCCAG
ATCATTGATG ATGCCTTCTT TAAAAGCTCC AACAGCCCAA GCAACCAGAT TTTAAGAGTG
ACCATCTATA GCCAGGAGTT CTCGCAACAA GATTTGCTTC CGTTGGTAGA TCAGGAAACA
ATAAAGGCTA GATATCTAGC TGGTGTAGAT AAACACCCGA GCTTATCGCC GGAAACTATC
CCGAACGTAA CCCATTGCTT CAAGACCTTG ATCAAAGTGT TGAGGGGGCC GATTTTGATG
AAACCAGAAG ACTCTTTCAA GACGATAAGT TTGGCCCACA CGGTTATGGA TGCGCAAATA
GACGTAAACC TTCTTTTCCA CAAGCTTTCA TTCACTTTGA ACGAACAAGA GTCCGATGTA
GTCCCTCCAA ACTTGACAGA GTTGCCAGAG TTGAAGGAAT CGTACATCCG AATGATCCAA
GAGTTGATCT ACTTAGGAAG AATCTATGGT AGTAGCATCG AAAACAACGA GTACAAGACT
CTGTACTCTT ACTCCGATAA TCTTTCTTTG GTATTCAAGA CTATTAGTGA ATACGACAAA
CACATCAACC AGGTCCATTT CCGCAATCAC AACTCGAACC AATTAGCGTT CTTGATCAAC
TTGAGTATCT GTTCGTATTT TCAGGACGAG CTTATCATCA AATGTTTTGA GAATACCATC
AAGTCCGATC CGGCCAACAA ATTGCATTAC GTAGACTCCT TAAGAAGTAC CATTAACTTC
AGAAACGGCT CTTCCACGAA CAACAAGTTG AATACCTACT TGAAAAACTT GACTGCTCTG
GGCGACTTGA TAGGTTTCCA TGAGTATATG GAGTCAATGA ACATTCTTGG AATTGATGTC
AGAGATCCAG CTGATATTGA CAACATCGAT GATGGCATTA TCATAGCTAT GTATAAAACC
AACTTCAAAA ACGACCCCAA GAATTATCAA TACTATAACA ACCATTTGCA AACCGTTGCT
AAAGTCAGAA AATCCTCGAA TTTATGGAAG TTCATCAACA ATGAAATCAT ACCATTAAAT
ATCGCTCTTG ACGAATTGAA TATCGAGGAA ATTACTGAAG ATGACGTAGT CATTACTGCT
TATGAGTTCA AGTTGGACGA CACTCTACAG GCTAATGGGT TTAGAAACGA CGCTAGTGAG
ATCTTGTTCT TACACAAGGC GTTGTTATCA GTAGCTGTGA ACAGAAAGAG CTATCTTTTA
TTGAACTACA TTGAAACAAA ACTCGCTGAT ATCATCAAAC TTCCAAAGGA AGATTTCACC
TATCAGAAAG CACTTGAACT TTTTGGTGCT GATGAGAGCA CCTCTGACTT TGAAATCATT
ACTAGGTTCC AGAATCGATT AATTTTGAAG TCCAAAAACG ATATCGATAG TGACATTAGA
ATCTTGAGAT ACTGCTTGAA GCTCATTGCT GAAGAGAAGA AATCACAGAT TTTGTTTAGC
TTTTTGAAAA ATGGGAAAGT AGTTTCGTCT CTTTTACCAG CAGAGAACTG GCCGGCAGGT
TTGGACAATA TCGGAAACAC CTGCTATTTG AACTCTTTAT TACAGTATTA CTTCTGTATC
AAGCCATTAA GAGACTTGAT TCTTTCCTTT GACGAAAACG ATGTTAATCA GGAGAAGATG
GGCCAGAAGA GAAAAATAGG AGGTAGAAAA GTCGAGGAAT TGGAACTCAC TCGTTCCAAT
CAGTTTGTGT ACCATTTAAG GTATTTGTTT GATGAAATGA TACACACCAA CAAAAGATGT
GTACAGCCAT CGAAAGATCT TGCCTACCTA TCGTTCTTGC CGTTGTCCAA TCCTGTTGAT
TTCAAAACTG AAGGAGAACC TGAAGTTATC GAGATTCTTG ATGAAGACGA TGACTACGTT
ATCAGTGGAA AGGATAGCAC GAGAACGAAT GCTATCTTAG TATCATCACA ACTGCCAGTG
CCAGAAGAGG ATGTAGAAAT GCTTCCAAGT AGTGATGATT ATGTCGAGAT ATCCAACGAA
CAAGAAGAAA GCGGTCTTCG TAGCCACAAC AGCATTGTCA ACATCCACAT TGAGAATGCC
AGCAACGAAG AAGACTCAGA TATGATTATA CTGGAACCGG ACTTAATTCA GTTGAACTAT
GTAGAAGTGC AGAACGGTCC TAAGTTGTTG CCAATCAGTA CAGACCAGAT GGAAAGTACA
ATAGAAGTAG GTAGACAGCA GGATGTTACG GAATGTATTG AAAATGTCAC CTTCCAGATT
GAAACGGCTC TAGAGCCAGA ACGGTTGGAT GACGACGGTG AACAGTATGA CCTCATCAAA
AGACTCTTTT ATGGAAAGAC CAAGCAAACT ATTACGCCGA TAGACGACAA ACACAATCCT
ATAGGTAAAC CTCGTGTTTC CATTGAGAGA TTTTTCAGTT TGATCATCAA CGTCAGCGAC
CATCCCAAGA GCATGTACGA CACATTGGAT AACTTCTTCA ACGAGGACAT TGTCAACTTG
GAGGAAGGTT TAGCCAAGAA GTCCATCACT GTGAGTGAAT TACCGGATAT CTTACAGTTT
CATGTTCAAA GAGTTATGTT TGATCGCGAA AGATTGATGG CATACAAGTC TTTGGAGCCA
ATTCCTTTCA GCGAAAAGAT CTACTTTGAC CGTTATCTAG ACACAGATGA TCCGATGATT
CTTCGTCGTC GTAGTGAAGT GTTCAAATGG AAGTCTGAGA TCCAAGAATT GACAGAGCAA
AAGAATGAGA TTCTCAATAT TGATGACGAA ACCAAACTCT CCATTATTGA TGCACTTGTA
ACAACGAAGA AATATCTTGA ACTGAAAATC ATCCCTCACG AAACAATGGG CATTAAGCCA
GATACAATTT TCGCTATTCA AGAGCAAATC GATAACTTGA GACAAAGATT GCTAGACATA
GACTCAAGGC TAGAGGTTTT ACGTGCGAGT GTAGCCAATC AGTTTACGTC CTATACCAAG
ATCGGGTACA CCATCTTTGC TATATTTATC CATAGAGGCG AGGCTAGTTA TGGCCATTAC
TGGGTTTATA TTCGAGATCC TCAACGTAAC ATTTTCAGGA AGTATAACGA CGAAACAGTG
AGTGAAGTTC CGTTCTCGGA GGTTTTCAAC TTTGCTGAAG GTAACACGGC TACTCCGTAC
TACATTGTGT ATGTCAAGGA TGAGTTGGAG AATGATTATG TTGATCCATT GAAGAGGGTC
ATCAATAAAT GTTGA
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| Protein sequence | SNVNSISNNN DNTVSNAESV STPTTSTSPS GTSVDGSSGR VYERTVLPPS ELVEYPFKTL
NRILDDMKWT IPMKQKFNIS LLNSIPFDYS TELSKLAGSP LFVYEALTLN NSLNYSPSLE
TVDYEDRNQT LSTIRGLLVN TSSSSSAKAV FHFRISILET NTNPFISSAL DKHEYHIIPK
SRISSDDLEA LHVLPKEDPQ IIDDAFFKSS NSPSNQILRV TIYSQEFSQQ DLLPLVDQET
IKARYLAGVD KHPSLSPETI PNVTHCFKTL IKVLRGPILM KPEDSFKTIS LAHTVMDAQI
DVNLLFHKLS FTLNEQESDV VPPNLTELPE LKESYIRMIQ ELIYLGRIYG SSIENNEYKT
SYSYSDNLSL VFKTISEYDK HINQVHFRNH NSNQLAFLIN LSICSYFQDE LIIKCFENTI
KSDPANKLHY VDSLRSTINF RNGSSTNNKL NTYLKNLTAS GDLIGFHEYM ESMNILGIDV
RDPADIDNID DGIIIAMYKT NFKNDPKNYQ YYNNHLQTVA KVRKSSNLWK FINNEIIPLN
IALDELNIEE ITEDDVVITA YEFKLDDTLQ ANGFRNDASE ILFLHKALLS VAVNRKSYLL
LNYIETKLAD IIKLPKEDFT YQKALELFGA DESTSDFEII TRFQNRLILK SKNDIDSDIR
ILRYCLKLIA EEKKSQILFS FLKNGKVVSS LLPAENWPAG LDNIGNTCYL NSLLQYYFCI
KPLRDLILSF DENDVNQEKM GQKRKIGGRK VEELELTRSN QFVYHLRYLF DEMIHTNKRC
VQPSKDLAYL SFLPLSNPVD FKTEGEPEVI EILDEDDDYV ISGKDSTRTN AILVSSQSPV
PEEDVEMLPS SDDYVEISNE QEESGLRSHN SILNYVEVQN GPKLLPISTD QMESTIEVGR
QQDVTECIEN VTFQIETALE PERLDDDGEQ YDLIKRLFYG KTKQTITPID DKHNPIGKPR
VSIERFFSLI INVSDHPKSM YDTLDNFFNE DIVNLEEGLA KKSITVSELP DILQFHVQRV
MFDRERLMAY KSLEPIPFSE KIYFDRYLDT DDPMILRRRS EVFKWKSEIQ ELTEQKNEIL
NIDDETKLSI IDALVTTKKY LESKIIPHET MGIKPDTIFA IQEQIDNLRQ RLLDIDSRLE
VLRASVANQF TSYTKIGYTI FAIFIHRGEA SYGHYWVYIR DPQRNIFRKY NDETVSEVPF
SEVFNFAEGN TATPYYIVYV KDELENDYVD PLKRVINKC
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