| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47968 |
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| Symbol | |
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| ID | 4840136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 199177 |
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| End bp | 202707 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391451 |
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| Product | predicted protein |
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| Protein accession | XP_001385372 |
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| Protein GI | 150865950 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.594248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGC TTCTATTTCT ATTGAGCCTC TGTATGATGG CGTACGTTGT GCTCGTAGCT
GCACTGCCGC GACTAGAGAA GGTCACCACC AGATATCTAC CTGATAGCCT ACTTCAAAAT
GATGCTGCTC CTCAGACTAC AGAACCTCCT TCCAAAAGAA CAACAGACTC GTCCATACTA
CCCTTGGACG TGAGATCACT AAAAGACTTT AAATTAACAG ACTTACTCTT GATCTCAGAC
GTCGACGGTA ACTTGCACGC TGTAGAACGT AAGGAAGGAG CTCTTATCTG GACACTTCCC
AGCGACGAAC CTCTAGTGAA AATCCAGTCC AATAGCTCAA CAGAAGATAG CCAGTCCAAT
ATCCTATGGT TTGTCGAGCC ATACCAGGAT GGATCTCTCT ATTATTTCAC ACCCAAATTT
GGGCTCAACA AACTTCCTAC TAGCATCAGA CAGTTGGTGA TGGAGTCTCC TTTCTCCCTC
AGTGGAGACG ACAAAATCTA CACCGGAAGC AGGAAAACTG CCCTCTATAC TGTCAACATC
TTCACAGGTG AGATTGTCTC ATCGTTCGGA AATGAGGAGA AATGCCCGGT TGCCAATACC
CACTACAAGA TAGACAACTT GTATCTGCGT CTGGATACCA TCAACATAGG GAGAACGACC
TACGAGTTGA CCATCCACTC CAAGTTGAAT ACCAATGTAG TTTGGAACGT GTCCTATTCT
CAATGGGGAC CCAACAATAT AGACAACGAC TTGATCATGC AAAACTCAGA GAGCATAGAT
AAACTCTACT TTACCCCTTT CTACAACAAG TCTATATTGG CTATCAACAA GGATATAAGT
GCACCCAAAT GGTTGACGAA CTTACCTTCT TTTGCTGTCA GTGTGTTTGA TGTCTTCAGC
AATCTCAAGA ACTCGGACTG TGTTCTTTTG CCTCACCCAT CGAAGATCTT CAACCAGCCA
CAACTCGATG ATGACAACGA CAACAATTCC GACCTTGTCT TCATCGACAG AACATCCAAC
AGAAAGGAGT GGTTTGCAAT GAGTTTTAAT AATTATCCTT CATTAATCAA AACGGCTCCA
ATTTCCAATT ACCAGTTGTA TTTGCTTAAG CTTCAGGCTG ACTTCCAAGA CTTGAATGTG
AATGTTGACT ACTTGAAGAA TTTTCAATTA TCTACGAGTC CACCAGAGGA AGTGAAAACT
TTGATTAGTG GCATACATAG AGCTTTTCAA TTGTCTGCCG ACACCTTGTA CCAGCCTTCT
TCTAGATTTG AAAAGAGTGA TGACATCAAA CGTATTGGAC AAAACGAGCA AACAGAACGC
ACAGAACAAG ACGAGCGGAC AGAGCAAGAC GATCAGAATG ACAATTCTTT GAAAACAGAT
TTAGAAGAGA TAAAGCCCAA TATCGCAGAG GGAGTTAATT TCGCTCATGA AACTTCACGT
TCAGAAGTCT TGTATCTACC ACCATCAAAC AATGAGGTGG AAAGTTACAG GCCCTACAAA
GACCCTGAAA CCAGCCATGA AATAATCAAT AATTTGGAAC CAAATTCCAC TACTGCTATC
ATTCGTAGAA TCTTGGAAGA CTTGGTTGTT TTGTTGGTTC TCTTTGTTTT AGTAATGACT
TTTGGAAAGT CCAACAAGTT TGTGCAAGGC TTTTTCAACA ATGGAAGCTT GGTGGGCCCA
GTCTCAATTG AGAAAGACGC GGTGTTCGAT AATGACGTTG TTCTTGATTC GAACTTTTCA
GTTTCGAACG ACAAAGAAAA AGTGTCTATT ACAGAGAAAG ACAAGAGTTC ACAAGTTGTT
GAGCTTGCAA ATCAGGACAA CAAAGATGCG AAAGATTCTA ATGAGGTATT CAAGAAAGTC
AAGATTGTTG TTCCTAACGA ATCATTAGAG AAAGCAAACG ACGATCCCAG TAAATTAGAA
GAAAATGTTG ATGACGATGA AGAAGGCAAC GGCGACGAAA TTACAACTAA GAAGAAGCGC
AAGAGAGGCA GTAGAGGTGG TAAAAGGGGT GGTCGTAGAG TTAATAAGAG CAAGGAAAAT
GCTGGTGATG ACCAAGAAAT CAACGACGAA AGTCCTGAAG AAGAGTTCAT CTCCATTGCT
ACCAAGAGCT TGGTAAAAAC TATCACTACT CCAGTGAAGA TTCCTTCCAA GAAATTACAA
ATCGAAAATA ACCTTGTGAT ATCTGACAAG ATTCTTGGTT ATGGGTCCCA TGGAACCATT
GTATACCAGG GCACGTTTGA GAACAGGCCC GTTGCAGTTA AGCGTATGCT TTTGGATTTC
TACGATGTAG CTAACCATGA AGTTCGCTTA TTGCAGGAAA GTGACGACCA TCCCAATGTC
ATCAGATATT TCTGTTCTCA ATCAAGCGAG TCCGAAAAGT TTTTATATAT TGCTTTGGAA
CTATGTCTCT GCTCGTTGGA AGATATTATT GAAAAGCCCA AGAAGTCTCC TCAACTCAGC
ATTCCTAAAG TTAATGACGT CTTGTATCAA TTGGCCAGTG GTTTACACTA TTTGCATTCA
TTGAAAATCG TTCATCGTGA TTTGAAGCCT CAGAACATAT TAGTTGCAGA TATCAAAAAA
ACATCGTCTT CAAAAGCAAC GACAAAGCCT TCCGAAGAGG AAAACAATGT GAGATTGCTT
ATCTCTGACT TTGGCTTATG TAAGAAGCTA GACTCTGACC AATCTTCGTT CAGAGCAACT
ACACAACATG CTGCTCTGGG AACTTCTGGA TGGAGAGCAC CAGAATTATT GTTGCATCAC
GATTTACTCG AAATATCCCC AGACACCATA TCCTCTGTTG GGTCTGGATC TCGTCACTCA
TTTACAGAGT CGTGGTCGAC TGTTACGAAC TCTTCTTCAG TACAAGCTTC AGGTGGAAAG
AGATTGACCA AGGCAATTGA CATTTTCTCC TTGGGATGTG TTTACTACTA CATTTTGTCT
GGAGGAATGC ATCCTTTTGG TGACAGATAT TTGCGTGAAG GTAATATCAT CAAGGGTGAG
TACGACATTT CCTTGTTAAA ACAGTGCTGC CCCAATGACA AGTATGAAGC CACCGATCTT
ATTGCCAGCA TGATCCATGC GAACCCAAGT AAAAGACGAA GCACATCTAA GATCTTAATT
CATCCATTAT TCTGGTCTTC TAAAAAGCGT TTGGAATTCT TATTAAAGGT CAGCGATAGA
TTCGAAGTGG AAAGAAGGGA TCCTCCTAGT GACTTATTAT TGAAACTTGA GGACCGTGCC
AATGCTGTCC ATGGAGGAAA CTGGCATAAG CAATTCGATG ATGAATTCAT GGACAACTTG
GGTAAATACA GAAAGTACCA CAAAGAGAAA CTAATGGATT TGCTAAGAGC TATTCGTAAT
AAGTACCATC ACTTTAACGA CATGCCTGAA ACATTACAAG CACAAATGAG CCCGCTTCCA
GGTGGGTTCT ACAAGTACTT CAACAACAAG TTCCCTAACT TGCTTATGCA GATATACTTC
TTGATTGAGG AGAATCTCGC AGAAGAACAT GCATTTAAGG ATTTTTACTA G
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| Protein sequence | MRKLLFLLSL CMMAYVVLVA ASPRLEKVTT RYLPDSLLQN DAAPQTTEPP SKRTTDSSIL
PLDVRSLKDF KLTDLLLISD VDGNLHAVER KEGALIWTLP SDEPLVKIQS NSSTEDSQSN
ILWFVEPYQD GSLYYFTPKF GLNKLPTSIR QLVMESPFSL SGDDKIYTGS RKTALYTVNI
FTGEIVSSFG NEEKCPVANT HYKIDNLYSR SDTINIGRTT YELTIHSKLN TNVVWNVSYS
QWGPNNIDND LIMQNSESID KLYFTPFYNK SILAINKDIS APKWLTNLPS FAVSVFDVFS
NLKNSDCVLL PHPSKIFNQP QLDDDNDNNS DLVFIDRTSN RKEWFAMSFN NYPSLIKTAP
ISNYQLYLLK LQADFQDLNV NVDYLKNFQL STSPPEEVKT LISGIHRAFQ LSADTLYQPS
SRFEKSDDIK RIGQNEQTER TEQDERTEQD DQNDNSLKTD LEEIKPNIAE GVNFAHETSR
SEVLYLPPSN NEVESYRPYK DPETSHEIIN NLEPNSTTAI IRRILEDLVV LLVLFVLVMT
FGKSNKFVQG FFNNGSLVGP VSIEKDAVFD NDVVLDSNFS VSNDKEKVSI TEKDKSSQVV
ELANQDNKDA KDSNEVFKKV KIVVPNESLE KANDDPSKLE ENVDDDEEGN GDEITTKKKR
KRGSRGGKRG GRRVNKSKEN AGDDQEINDE SPEEEFISIA TKSLVKTITT PVKIPSKKLQ
IENNLVISDK ILGYGSHGTI VYQGTFENRP VAVKRMLLDF YDVANHEVRL LQESDDHPNV
IRYFCSQSSE SEKFLYIALE LCLCSLEDII EKPKKSPQLS IPKVNDVLYQ LASGLHYLHS
LKIVHRDLKP QNILVADIKK TSSSKATTKP SEEENNVRLL ISDFGLCKKL DSDQSSFRAT
TQHAASGTSG WRAPELLLHH DLLEISPDTI SSVGSGSRHS FTESWSTVTN SSSVQASGGK
RLTKAIDIFS LGCVYYYILS GGMHPFGDRY LREGNIIKGE YDISLLKQCC PNDKYEATDL
IASMIHANPS KRRSTSKILI HPLFWSSKKR LEFLLKVSDR FEVERRDPPS DLLLKLEDRA
NAVHGGNWHK QFDDEFMDNL GKYRKYHKEK LMDLLRAIRN KYHHFNDMPE TLQAQMSPLP
GGFYKYFNNK FPNLLMQIYF LIEENLAEEH AFKDFY
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