Gene PICST_47584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47584 
SymbolMAL3 
ID4840088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp34361 
End bp36106 
Gene Length1746 bp 
Protein Length581 aa 
Translation table12 
GC content38% 
IMG OID640391403 
Productmaltose permease 
Protein accessionXP_001385693 
Protein GI126138340 
COG category 
COG ID 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.547571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG TGTTTGTTGA AGATATAAAA AATCCAGAAA AGGTCGTCAT AGTGAACTCA 
GTTGCTAAAA AGGCCTCTGA TGACTCGTCC TTGAATTCAG TAGACGACTA TGTGTCTAGG
TTCTTAGATA TGTCCAATGA GGCTAGAGAT AACGATCACA ATGAAAAAAG AATGCCACTT
AGAGAAGGTT TAAAAACATT TCCAAAGGCA GTAATGTGGT CCATCATTCT CTCTACTGCT
TTGGTAATGG AGGGATATGA TACTTACCTT TTGAATTCTT TGTTTGGTTT TCAGGCGTTC
AACAAAAAGT TTGGTCACTT CGATAAAAGA CTCAACAAAT ATATTATCGA AGCTAAATGG
CAAACTGGTT TGAATATGGG CTATAATAGT GGTTGTGTTA TTGGACTTGC AATTTCTGGT
TTTGTAGCTG ATATTTATGG TTACAGAAAA ACTTTAATGA CAGCTTTGGC TTCTTCCATA
GCTTTGATTT TTCTTCAGTT TTTCTCTCCT AACAAGGAAG TTTTGTTGCT TGCATACGTT
CTTTTGGGGA TCAACTGGGG CTCTTATCAA ACATTAACTG TTACATACGC CAGTGAAGTT
GCTCCAACAA CTTTGCGTGT ATATCTCACT ACGTATGTCA ATATGTGTTG GGTATTTGGC
CAGTTGCTTG GTTCTGGTGT GCTTAAGGCT GTTTCTAGTA TGTCAGAAAC GCCGAATTCA
TACAGAATTC CTTTTGCTGT TCAATGGGTA TGGCCAATTC CGTTAATCAT CGGTGTATAC
CTTGCTCCTG AGTCACCATG GTTCTTAGTC AAAAGAGGAA GAGATCAGGA TGCTAAGAAT
TCCTTGAAGC GTCTTTTGTC TGAGAATCCA CTCATGCCAG ACAAAGATGT ATTATCCCAA
GCAATGTTGA CAAAAATCCA GATGACTGTC AGAGAAGAAG ATGCAAAAGA TGTTGGAAAT
TTTAGCGATT GTTTCAAGGG AACAAACTGG AGACGAACTA GAATTGCTGG TTTGACTTGG
TTTTTTCAAT GTTTCTGTGG ATCTTCTTTG ATGGGCTATT CAACTGTATT TTACCAACAA
GCGGGATTAC CTGTTAGTAT GTCATTTACT TTTTCTATCA TACAATACTG TTTAGGTATT
GTTGGTACTG TTAGTTCTTG GTTTCTTTCC CAAAAGGTAG GAAGAAGAAA AATTTATTTA
ACCGGGTTAA GTACAATGAG CCTTTTGATG TTGCTAGTAG GAGGATTGGG AACCTCCAGC
TCTAAAAGTG CAAAGTGGGG TGTCGGTACT CTCCTATTAC TTTTTACATT TGTTTATGAT
TTATCAGTGG GTCCAATGTG CTACTGTATT GTTGCTGAAA TGCCATCTTC CAAGTTGCGT
ACCAAGACTG TTATGCTTGC CAGAAATACT TACAACGTTG CTCACATTGT TGCTGGTGTG
GTCACTCCTT ACATGTTGAG CCCAACTGCT TGGAATTGGA AAGCCAAAAC TGGGTTTTTC
TGGGCTGGAA CTGCTTTCGT TGGTTCTGTT TGGGTCTTTT TTGAATTGCC TGAAACTAAA
AACAGGACTT ATGCTGAATT GGATATTTTA TTCCAAGATG GAGTTTCTTC TCGCAAATTT
AATAGCACCG ACGTTGAGGT ATTTGATGCT GGAAAGTTGA TGGAAAAATA TGGTGCAACT
GGTATTAAAC AGATTATTGA GCATGTCGAC AAAACCAATT ATGATATTCT TGAACAAAAC
CGTTGA
 
Protein sequence
MSSVFVEDIK NPEKVVIVNS VAKKASDDSS LNSVDDYVSR FLDMSNEARD NDHNEKRMPL 
REGLKTFPKA VMWSIILSTA LVMEGYDTYL LNSLFGFQAF NKKFGHFDKR LNKYIIEAKW
QTGLNMGYNS GCVIGLAISG FVADIYGYRK TLMTALASSI ALIFLQFFSP NKEVLLLAYV
LLGINWGSYQ TLTVTYASEV APTTLRVYLT TYVNMCWVFG QLLGSGVLKA VSSMSETPNS
YRIPFAVQWV WPIPLIIGVY LAPESPWFLV KRGRDQDAKN SLKRLLSENP LMPDKDVLSQ
AMLTKIQMTV REEDAKDVGN FSDCFKGTNW RRTRIAGLTW FFQCFCGSSL MGYSTVFYQQ
AGLPVSMSFT FSIIQYCLGI VGTVSSWFLS QKVGRRKIYL TGLSTMSLLM LLVGGLGTSS
SKSAKWGVGT LLLLFTFVYD LSVGPMCYCI VAEMPSSKLR TKTVMLARNT YNVAHIVAGV
VTPYMLSPTA WNWKAKTGFF WAGTAFVGSV WVFFELPETK NRTYAELDIL FQDGVSSRKF
NSTDVEVFDA GKLMEKYGAT GIKQIIEHVD KTNYDILEQN R