Gene PICST_36788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36788 
Symbol 
ID4839869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1279879 
End bp1281231 
Gene Length1353 bp 
Protein Length450 aa 
Translation table12 
GC content42% 
IMG OID640391184 
Productconserved hypothetical protein 
Protein accessionXP_001385941 
Protein GI150866366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC ATGACGAATA CTCCTCTGAC GAGGAAGAGT TGGTAGACAA GAACCAGAAA 
TCAGACGTTC TTTTGGGATT TGTAGATGCT CCCATAGTTG AAGAAGAAGA TGAAAATGAC
GATGAACTGG ACCTTCCCAC AATCGAAGAC ACTTTCATTG GAAGCAAACC GTTATGGCTC
CATCCAGAAT CGATTCCAGA TGAGAAATTG GTGACTTGCG ACAATTGTGG AAAGAAAATG
GCTCTTTTGC TCCAGGCATA CTCTCCCTTA GATGGAAAGT TGTACGACAG AGTGCTTTAT
ATATTTGGAT GTAAGAACAC GGCCCAATGC TCCAAGAAGA AAGGATCGAT AAAAGCATTC
AGGGGTATTT CCAAAGATGC GGAAAGAATT GCTCAAATTA AACAAGAACA AGACGAAGCT
GTTCAGAAGG ATTTGGATGA GAAATTACAA CTTGACAACA AAAAGAAGTT CAATATCGAA
TTGACCAAGG ACCTCTTTTC AACTGACAAG AGCACAACCA ATTCGAGCAA AGCATCCAAC
CCATTTGGTT CTTCTACAGG GTCGAATCCT TTCGCTTCTT CCACCTCACA AAACCCTTTT
GCTCCCAAAC AAAGTCCTTT TGATGCCAAT CCATTTGGAA AGAAAGAAGA ACCAAAAAAG
GAAGAAAAAC CAGCAAAACA ATCGTATGCT GAAATTGCTT CCAAAAATAT ACCAAAGAAA
AAAGGAAAGT CAAACAAGTC CCAATACGAA CTTCCAGCAT ACGCTGGTAG CTTTTTATAT
GTAGACAAGG AAACGTTCAA GAAAGAGGCT GCTGACCCGG AATTGGAAAA ATACAAGCAT
TTGATAGATA TGGACGTTAA CAAGGAAGAT GGCCAAGGAA GCGGCAGCAG AAGAGACTCA
ACGTCGTCTG TTTCTGCGTC AGGTATAGAC CCCAACAGAG CCAAGATCTC CAACATGTTG
GACGATAAGT ATTTCGAAAA CTTCTCTAAT ACCGTCAAGC ATAACCCAGG ACAAGTATTG
AGATACAATC TCGGCGGTAC ACCCTTGTTG TACAGTGGCA GAGACGATAT AGCTAAGAAG
TTTTTGGGTG GAGCTTTCAA CGTGCCTAAG CCAGGATTCA ACCCATCTTC AGAACGCCAG
TTTGAAATAC AGTTGATGCC TAAAGCCATT ATTGACTTAG AGAACATCAA AGATGACGAA
GTCAACATTG CTGATATCCT CAACGGTATG TCATGGGGTA CTATTATTGT TTGCACTGAT
GTCGAGGACT ATGTTCCAGA AGATTCGCTC GATTCCAACC GTGTGGCATA CATCGAGGAA
TGGTGTGGAG TTCAATGGGA AGAAAGTGTT TAG
 
Protein sequence
MSSHDEYSSD EEELVDKNQK SDVLLGFVDA PIVEEEDEND DESDLPTIED TFIGSKPLWL 
HPESIPDEKL VTCDNCGKKM ALLLQAYSPL DGKLYDRVLY IFGCKNTAQC SKKKGSIKAF
RGISKDAERI AQIKQEQDEA VQKDLDEKLQ LDNKKKFNIE LTKDLFSTDK STTNSSKASN
PFGSSTGSNP FASSTSQNPF APKQSPFDAN PFGKKEEPKK EEKPAKQSYA EIASKNIPKK
KGKSNKSQYE LPAYAGSFLY VDKETFKKEA ADPELEKYKH LIDMDVNKED GQGSGSRRDS
TSSVSASGID PNRAKISNML DDKYFENFSN TVKHNPGQVL RYNLGGTPLL YSGRDDIAKK
FLGGAFNVPK PGFNPSSERQ FEIQLMPKAI IDLENIKDDE VNIADILNGM SWGTIIVCTD
VEDYVPEDSL DSNRVAYIEE WCGVQWEESV